RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ARL4CP56559 192 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 PSMC1P62191 440 aaKnown RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ZBED6P86452 979 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 FAAP100Q0VG06 881 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SEMA5AQ13591 1074 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 BLMHQ13867 455 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ODF1Q14990 250 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 PLCB4Q15147 1175 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SPRED3Q2MJR0 410 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TUBB8Q3ZCM7 444 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC38Q502W7 563 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ARSJQ5FYB0 599 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ATAT1Q5SQI0 421 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 MFSD4BQ5TF39 518 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 OVOS1Q6IE37 1185 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 IQCEQ6IPM2 695 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TMCO3Q6UWJ1 677 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 DSTYKQ6XUX3 929 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 NYAP1Q6ZVC0 841 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 UBE2Q1Q7Z7E8 422 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TBC1D1Q86TI0 1168 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 MAP4K3Q8IVH8 894 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 BRSK2Q8IWQ3 736 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SULF2Q8IWU5 870 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 FTSJ3Q8IY81 847 aaKnown RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 KRT78Q8N1N4 520 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 MIER2Q8N344 545 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 OR2C3Q8N628 320 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ARL6IP6Q8N6S5 226 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 LSMEM1Q8N8F7 131 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 FAM156AQ8NDB6 213 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 BVESQ8NE79 360 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SLC30A5Q8TAD4 765 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ASAP3Q8TDY4 903 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SSH1Q8WYL5 1049 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 KCTD13Q8WZ19 329 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 NXPE3Q969Y0 559 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 KIFC2Q96AC6 838 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 C1GALT1C1Q96EU7 318 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SCLYQ96I15 445 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 RSRC1Q96IZ7 334 aaKnown RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 UBXN10Q96LJ8 280 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 ZSCAN31Q96LW9 406 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 RIPOR3Q96MK2 946 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 HHIPQ96QV1 700 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SLC9A7Q96T83 725 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TBCBQ99426 244 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 MAP3K14Q99558 947 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 GRIP2Q9C0E4 1043 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TMEM60Q9H2L4 133 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CLEC4MQ9H2X3 399 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TSPY26PQ9H489 355 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 RSAD1Q9HA92 442 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 EMC7Q9NPA0 242 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 PDLIM7Q9NR12 457 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 SMYD2Q9NRG4 433 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 TOPORSQ9NS56 1045 aaPredicted RBP3.34□□□□□ -1.87
HMGN4-202ENST00000477243 NSMCE4AQ9NXX6 385 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 FNIP2Q9P278 1114 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 PADI4Q9UM07 663 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CRYL1Q9Y2S2 319 aa3.34□□□□□ -1.87
HMGN4-202ENST00000477243 CNOT1A5YKK6 2376 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SPG11Q96JI7 2443 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 WDFY4Q6ZS81 3184 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 RRN3P2A6NIE6 340 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SMTNL1A8MU46 457 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 FAM155AB1AL88 458 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 F5H0A9 414 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CBX4O00257 560 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 GFRA2O00451 464 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 MGEA5O60502 916 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 MMP20O60882 483 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PPFIA3O75145 1194 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PPM1BO75688 479 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 SASH3O75995 380 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CD4P01730 458 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CAPNS1P04632 268 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 DHRS4L1P0CG22 281 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 MYCLP12524 364 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 RAG1P15918 1043 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 XBP1P17861 261 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PPM1AP35813 382 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PEX19P40855 299 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ATXN1P54253 815 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 PMS1P54277 932 aaKnown RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 DSG1Q02413 1049 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 NEXNQ0ZGT2 675 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TRIM32Q13049 653 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CCINQ13939 588 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CLEC16AQ2KHT3 1053 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 C4orf17Q53FE4 359 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 WDR44Q5JSH3 913 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CCDC158Q5M9N0 1113 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 TMEM201Q5SNT2 666 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 CFAP58Q5T655 872 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 IZUMO3Q5VZ72 239 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 HIBCHQ6NVY1 386 aaPredicted RBP3.33□□□□□ -1.88
HMGN4-202ENST00000477243 HDXQ7Z353 690 aa3.33□□□□□ -1.88
HMGN4-202ENST00000477243 ADAT2Q7Z6V5 191 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms