RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SMIM10L2BP0DMW5 78 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 RBL2Q08999 1139 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
VARS2-208ENST00000477052 CTCFLQ8NI51 663 aaPredicted RBP13.47□□□□□ -0.25
VARS2-208ENST00000477052 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
VARS2-208ENST00000477052 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
VARS2-208ENST00000477052 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 XIRP2A4UGR9 3374 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 SPATA31C2B4DYI2 1134 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
VARS2-208ENST00000477052 SH2B2O14492 632 aaPredicted RBP13.46□□□□□ -0.25
VARS2-208ENST00000477052 MEIS2O14770 477 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 LPXNO60711 386 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 UBE2SQ16763 222 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 KCNV1Q6PIU1 500 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 CASC1Q6TDU7 716 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 SERINC5Q86VE9 423 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 DBF4BQ8NFT6 615 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 RRP36Q96EU6 259 aaKnown RBP13.46□□□□□ -0.25
VARS2-208ENST00000477052 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
VARS2-208ENST00000477052 UHRF1Q96T88 793 aaPredicted RBP13.46□□□□□ -0.25
VARS2-208ENST00000477052 RNPEPQ9H4A4 650 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 MUC3AQ02505 3323 aa13.46□□□□□ -0.25
VARS2-208ENST00000477052 FRMPD4Q14CM0 1322 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 COL4A4P53420 1690 aaPredicted RBP13.45□□□□□ -0.26
VARS2-208ENST00000477052 CCDC69A6NI79 296 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
VARS2-208ENST00000477052 LGR5O75473 907 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 TGFB3P10600 412 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 IKBKEQ14164 716 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 CREB3L3Q68CJ9 461 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 SAMD3Q8N6K7 520 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 GPR20Q99678 358 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 ESYT1Q9BSJ8 1104 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 SPZ1Q9BXG8 430 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 RAPGEFL1Q9UHV5 662 aa13.45□□□□□ -0.26
VARS2-208ENST00000477052 ABHD14A-ACY1A0A1B0GW23 586 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 LINC01553A4QN01 128 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 FIBPO43427 364 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 ATP9AO75110 1047 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 DDAH1O94760 285 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 GJB5O95377 273 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 BMP1P13497 986 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 ICAM3P32942 547 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 MCM5P33992 734 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 TRAF1Q13077 416 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 GNPTABQ3T906 1256 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 METTL7BQ6UX53 244 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 MYOCDQ8IZQ8 938 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 CUL5Q93034 780 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 ZBTB10Q96DT7 871 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 TCEANC2Q96MN5 208 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
VARS2-208ENST00000477052 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
VARS2-208ENST00000477052 SEC63Q9UGP8 760 aaKnown RBP13.44□□□□□ -0.26
VARS2-208ENST00000477052 UPP2O95045 317 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 KIF5BP33176 963 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 ARHGAP4P98171 946 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 NEDD9Q14511 834 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 PCNX4Q63HM2 1172 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 RAD9AQ99638 391 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
VARS2-208ENST00000477052 PARNO95453 639 aaKnown RBP13.42□□□□□ -0.26
VARS2-208ENST00000477052 ITGB5P18084 799 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 POU3F3P20264 500 aaPredicted RBP13.42□□□□□ -0.26
VARS2-208ENST00000477052 MARK3P27448 753 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 HOXC8P31273 242 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 NECTIN1Q15223 517 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 RUFY4Q6ZNE9 571 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 HEATR3Q7Z4Q2 680 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 MICU3Q86XE3 530 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 MAP3K14Q99558 947 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
VARS2-208ENST00000477052 PIK3CDO00329 1044 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 TCF7P36402 384 aaPredicted RBP13.41□□□□□ -0.26
VARS2-208ENST00000477052 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
VARS2-208ENST00000477052 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 TGS1Q96RS0 853 aaKnown RBP13.41□□□□□ -0.26
VARS2-208ENST00000477052 LZTS2Q9BRK4 669 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
VARS2-208ENST00000477052 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
VARS2-208ENST00000477052 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 STAM2O75886 525 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 AMHP03971 560 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 KCNA2P16389 499 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 ERVK-21P61565 698 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 ADAM17P78536 824 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms