RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 CDK7P50613 346 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 FOSBP53539 338 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 RTP1P59025 263 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 NR5A1Q13285 461 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 DIS3L2Q8IYB7 885 aaKnown RBP20.24■□□□□ 0.83
SMIM4-202ENST00000476842 SLC43A3Q8NBI5 491 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 TNFRSF25Q93038 417 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 NR2E3Q9Y5X4 410 aa20.24■□□□□ 0.83
SMIM4-202ENST00000476842 ARVCFO00192 962 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 SETQ01105 290 aaPredicted RBP20.23■□□□□ 0.83
SMIM4-202ENST00000476842 GUCY1B3Q02153 619 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 ITGA7Q13683 1181 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 SAFBQ15424 915 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMIM4-202ENST00000476842 INF2Q27J81 1249 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 MOXD1Q6UVY6 613 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 PIK3AP1Q6ZUJ8 805 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 SMC3Q9UQE7 1217 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 KIAA1217Q5T5P2 1943 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 GRIN2DO15399 1336 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 NFASCO94856 1347 aa20.23■□□□□ 0.83
SMIM4-202ENST00000476842 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
SMIM4-202ENST00000476842 GJB2P29033 226 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 Q4G0T1 1027 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 PRR16Q569H4 304 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 EARS2Q5JPH6 523 aaKnown RBP20.22■□□□□ 0.83
SMIM4-202ENST00000476842 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 LENG9Q96B70 501 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 MBOAT7Q96N66 472 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 TOX2Q96NM4 488 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 GPR20Q99678 358 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 PKD2L1Q9P0L9 805 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
SMIM4-202ENST00000476842 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
SMIM4-202ENST00000476842 IPO5O00410 1097 aaKnown RBP20.21■□□□□ 0.83
SMIM4-202ENST00000476842 PSMC6P62333 389 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 TLE2Q04725 743 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
SMIM4-202ENST00000476842 TRIM60Q495X7 471 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 NEK8Q86SG6 692 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 KAT2BQ92831 832 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 ZNF577Q9BSK1 485 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 TBC1D22BQ9NU19 505 aa20.21■□□□□ 0.83
SMIM4-202ENST00000476842 DHX15O43143 795 aaKnown RBP20.2■□□□□ 0.82
SMIM4-202ENST00000476842 LETM2Q2VYF4 491 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 NBPF20Q3BBV1 942 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 NAP1L4Q99733 375 aaKnown RBP20.2■□□□□ 0.82
SMIM4-202ENST00000476842 C16orf70Q9BSU1 422 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
SMIM4-202ENST00000476842 JPH1Q9HDC5 661 aaPredicted RBP20.2■□□□□ 0.82
SMIM4-202ENST00000476842 SLC9A2Q9UBY0 812 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 TELO2Q9Y4R8 837 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
SMIM4-202ENST00000476842 GSTTP1A0A1W2PQM5 241 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 DCDC2CA8MYV0 355 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 MSH4O15457 936 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 TDP2O95551 362 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 F2P00734 622 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 GCFC2P16383 781 aaKnown RBP20.19■□□□□ 0.82
SMIM4-202ENST00000476842 SP4Q02446 784 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 INTS4Q96HW7 963 aaKnown RBP20.19■□□□□ 0.82
SMIM4-202ENST00000476842 KATNAL1Q9BW62 490 aa20.19■□□□□ 0.82
SMIM4-202ENST00000476842 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
SMIM4-202ENST00000476842 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 HAS3O00219 553 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 ATG7O95352 703 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 LGALS2P05162 132 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 PSEN2P49810 448 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 PTPN11Q06124 597 aaPredicted RBP20.18■□□□□ 0.82
SMIM4-202ENST00000476842 NFRKBQ6P4R8 1299 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 RIT2Q99578 217 aa20.18■□□□□ 0.82
SMIM4-202ENST00000476842 H3BRB1 525 aa20.17■□□□□ 0.82
SMIM4-202ENST00000476842 PQBP1O60828 265 aaKnown RBP20.17■□□□□ 0.82
SMIM4-202ENST00000476842 ZNF286BP0CG31 522 aa20.17■□□□□ 0.82
SMIM4-202ENST00000476842 TCF7P36402 384 aaPredicted RBP20.17■□□□□ 0.82
SMIM4-202ENST00000476842 FAAP100Q0VG06 881 aa20.17■□□□□ 0.82
SMIM4-202ENST00000476842 MFSD10Q14728 455 aa20.17■□□□□ 0.82
SMIM4-202ENST00000476842 SLC5A5Q92911 643 aa20.17■□□□□ 0.82
SMIM4-202ENST00000476842 TUT1Q9H6E5 874 aaKnown RBP20.17■□□□□ 0.82
SMIM4-202ENST00000476842 DDX25Q9UHL0 483 aaKnown RBP20.17■□□□□ 0.82
SMIM4-202ENST00000476842 H0YGN5 161 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 TLR3O15455 904 aaKnown RBP20.16■□□□□ 0.82
SMIM4-202ENST00000476842 CCNT1O60563 726 aaKnown RBP20.16■□□□□ 0.82
SMIM4-202ENST00000476842 CD4P01730 458 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMIM4-202ENST00000476842 ACTR2P61160 394 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 KIAA0753Q2KHM9 967 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 UTP14CQ5TAP6 766 aaKnown RBP20.16■□□□□ 0.82
SMIM4-202ENST00000476842 LARP1BQ659C4 914 aaKnown RBP20.16■□□□□ 0.82
SMIM4-202ENST00000476842 SESTD1Q86VW0 696 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 FAM126BQ8IXS8 530 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 UIMC1Q96RL1 719 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
SMIM4-202ENST00000476842 DDX39AO00148 427 aaKnown RBP20.15■□□□□ 0.82
SMIM4-202ENST00000476842 SLC37A4O43826 429 aa20.15■□□□□ 0.82
SMIM4-202ENST00000476842 LGR5O75473 907 aa20.15■□□□□ 0.82
SMIM4-202ENST00000476842 CCNE2O96020 404 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms