RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	KCND1	Q9NSA2	647 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	ATAD3A	Q9NVI7	634 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	SIRT5	Q9NXA8	310 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	WDR35	Q9P2L0	1181 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	MYO1A	Q9UBC5	1043 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	CRNN	Q9UBG3	495 aa	Predicted RBP	4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	DMGDH	Q9UI17	866 aa	Known RBP	4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	RASAL2	Q9UJF2	1139 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	GGA2	Q9UJY4	613 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	CFL2	Q9Y281	166 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	AXIN2	Q9Y2T1	843 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	ANGPTL3	Q9Y5C1	460 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	PCDHB4	Q9Y5E5	795 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	FADS3	Q9Y5Q0	445 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	SLC4A4	Q9Y6R1	1079 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	RTL1	A6NKG5	1358 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	MROH2A	A6NES4	1674 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	USP32	Q8NFA0	1604 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	MAP3K19	Q56UN5	1328 aa		4.21	□□□□□ -1.74
LSM2-211	ENST00000475835	PLA2R1	Q13018	1463 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	GPR75-ASB3	A0A0A6YYF3	556 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	hCG_1984214	I3L0E3	225 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ELL2	O00472	640 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	APOL1	O14791	398 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KMO	O15229	486 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SRGAP3	O43295	1099 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ZBTB14	O43829	449 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	USO1	O60763	962 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TACC1	O75410	805 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	FBXO21	O94952	628 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	RASGRP1	O95267	797 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ZSCAN22	P10073	491 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	PTPN2	P17706	415 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	RXRA	P19793	462 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SFPQ	P23246	707 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ANXA13	P27216	316 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ADD2	P35612	726 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ATP6V1E1	P36543	226 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	NR2C2	P49116	596 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ETV1	P50549	477 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	CLCN6	P51797	869 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	THOP1	P52888	689 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ALDH18A1	P54886	795 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TUBB4B	P68371	445 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	CAP1	Q01518	475 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	PFKP	Q01813	784 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KLHL30	Q0D2K2	578 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TMEM62	Q0P6H9	643 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SQLE	Q14534	574 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ADRM1	Q16186	407 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ANO4	Q32M45	955 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	MTERF2	Q49AM1	385 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SLC44A4	Q53GD3	710 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	C20orf194	Q5TEA3	1177 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	IL23R	Q5VWK5	629 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	FBXW10	Q5XX13	1052 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	MCTP1	Q6DN14	999 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	MZT2B	Q6NZ67	158 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KDELC1	Q6UW63	502 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	CWC27	Q6UX04	472 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ZNF600	Q6ZNG1	722 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	CEP128	Q6ZU80	1094 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ZNF365	Q70YC5	407 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	BZW1	Q7L1Q6	419 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KRT28	Q7Z3Y7	464 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	RHOT2	Q8IXI1	618 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM20C	Q8IXL6	584 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ARHGAP18	Q8N392	663 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	XXYLT1	Q8NBI6	393 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM71B	Q8TC56	605 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	DQX1	Q8TE96	717 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SCG3	Q8WXD2	468 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	PEX13	Q92968	403 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TSR2	Q969E8	191 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	INTS12	Q96CB8	462 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	NUDT16	Q96DE0	195 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	C11orf24	Q96F05	449 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TMX3	Q96JJ7	454 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ARL5B	Q96KC2	179 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	NELL2	Q99435	816 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TSG101	Q99816	390 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	TSEN34	Q9BSV6	310 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	CCDC28B	Q9BUN5	200 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	AP1M1	Q9BXS5	423 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	FOXP3	Q9BZS1	431 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	API5	Q9BZZ5	524 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KLHL4	Q9C0H6	718 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	INTS2	Q9H0H0	1204 aa	Known RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SIL1	Q9H173	461 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	ACAD9	Q9H845	621 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	VPS37B	Q9H9H4	285 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	L2HGDH	Q9H9P8	463 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	EBF2	Q9HAK2	575 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	POLM	Q9NP87	494 aa	Predicted RBP	4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	STARD7	Q9NQZ5	370 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	STRN4	Q9NRL3	753 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	KLC4	Q9NSK0	619 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	NDFIP2	Q9NV92	336 aa		4.2	□□□□□ -1.74
LSM2-211	ENST00000475835	SLC39A1	Q9NY26	324 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms