RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 MAP3K15Q6ZN16 1313 aa12.48□□□□□ -0.41
U2AF1-209ENST00000475639 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ELF3P78545 371 aaPredicted RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ITGB3BPQ13352 177 aaPredicted RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 AMFRQ9UKV5 643 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ORC6Q9Y5N6 252 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 EIF4A1P60842 406 aaKnown RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 PPARDQ03181 441 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 PAK1Q13153 545 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 KRT31Q15323 416 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 FGD4Q96M96 766 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 FAM8A1Q9UBU6 413 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 DUSP10Q9Y6W6 482 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 YWHAEP62258 255 aaKnown RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 IL1RL1Q01638 556 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ZNF174Q15697 407 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ANKRD20A4Q4UJ75 823 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 RUBCNQ92622 972 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 GRM8O00222 908 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
U2AF1-209ENST00000475639 SPATA4Q8NEY3 305 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 C15orf41Q9Y2V0 281 aa12.47□□□□□ -0.41
U2AF1-209ENST00000475639 SRRM3A6NNA2 597 aaPredicted RBP12.46□□□□□ -0.41
U2AF1-209ENST00000475639 NOP14P78316 857 aaKnown RBP12.46□□□□□ -0.41
U2AF1-209ENST00000475639 RNASELQ05823 741 aaKnown RBP12.46□□□□□ -0.41
U2AF1-209ENST00000475639 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 SEMA3EO15041 775 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 LPXNO60711 386 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 CASP1P29466 404 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
U2AF1-209ENST00000475639 LACTB2Q53H82 288 aaPredicted RBP12.46□□□□□ -0.41
U2AF1-209ENST00000475639 ARMC3Q5W041 872 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 KBTBD3Q8NAB2 608 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 NRBF2Q96F24 287 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
U2AF1-209ENST00000475639 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.42
U2AF1-209ENST00000475639 GNGT2O14610 69 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 FAM153BP0C7A2 387 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 STAT1P42224 750 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 FAM153CQ494X1 144 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 FAM210AQ96ND0 272 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 ZNF570Q96NI8 536 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 MAPK8IP1Q9UQF2 711 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 ANGPTL3Q9Y5C1 460 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 MLH3Q9UHC1 1453 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 SUN1O94901 812 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 HSPA8P11142 646 aaKnown RBP12.46□□□□□ -0.42
U2AF1-209ENST00000475639 P4HA1P13674 534 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 DPYDQ12882 1025 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 TBC1D25Q3MII6 688 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 TNNI3KQ59H18 835 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 USP49Q70CQ1 688 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 C3orf20Q8ND61 904 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 POMGNT1Q8WZA1 660 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 CDKL2Q92772 493 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 ATP6V1G3Q96LB4 118 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 SMARCAL1Q9NZC9 954 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.46□□□□□ -0.42
U2AF1-209ENST00000475639 FPGT-TNNI3KV9GXZ4 949 aa12.46□□□□□ -0.42
U2AF1-209ENST00000475639 MST1RQ04912 1400 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 KCNQ3O43525 872 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 ANP32DO95626 131 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 DNM2P50570 870 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 SCYL1Q96KG9 808 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
U2AF1-209ENST00000475639 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 FBXO2Q9UK22 296 aaPredicted RBP12.45□□□□□ -0.42
U2AF1-209ENST00000475639 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
U2AF1-209ENST00000475639 RNF113AO15541 343 aaKnown RBP12.45□□□□□ -0.42
U2AF1-209ENST00000475639 STX1BP61266 288 aa12.45□□□□□ -0.42
U2AF1-209ENST00000475639 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
U2AF1-209ENST00000475639 SFMBT2Q5VUG0 894 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms