RNA–Protein interactions for RNA: ENST00000474339.1

RNF25-205, Transcript of ring finger protein 25, human

TSL 2

Gene RNF25, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-205	ENST00000474339	CAND2	O75155	1236 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	LGALS2	P05162	132 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	PBX2	P40425	430 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	NAPA	P54920	295 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	MTMR1	Q13613	665 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	COL9A3	Q14050	684 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	MCTP2	Q6DN12	878 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	BLOC1S2	Q6QNY1	142 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	TNPO1	Q92973	898 aa	Known RBP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	ATP6V0A1	Q93050	837 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	VWCE	Q96DN2	955 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	ZFP91	Q96JP5	570 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	CTAGE1	Q96RT6	745 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	RIC8A	Q9NPQ8	531 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	BRPF3	Q9ULD4	1205 aa		13.79	□□□□□ -0.2
RNF25-205	ENST00000474339		V9GY48	417 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF25-205	ENST00000474339	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	SORBS3	O60504	671 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	CXCL10	P02778	98 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	KCNJ6	P48051	423 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	METAP2	P50579	478 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	CNKSR3	Q6P9H4	555 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	SERINC5	Q86VE9	423 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	RAB11FIP4	Q86YS3	637 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	PPP1R13L	Q8WUF5	828 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	SEPT1	Q8WYJ6	367 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	JAKMIP1	Q96N16	626 aa	Known RBP	13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	JADE2	Q9NQC1	790 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	BARHL2	Q9NY43	387 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	UBIAD1	Q9Y5Z9	338 aa		13.78	□□□□□ -0.2
RNF25-205	ENST00000474339	hCG_1642624	A0A1W2PR95	340 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	MYH7B	A7E2Y1	1941 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	DLL1	O00548	723 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	SMIM10L2A	P0DMW4	78 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	SMIM10L2B	P0DMW5	78 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	ITGB5	P18084	799 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	HOXC8	P31273	242 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	ADCY7	P51828	1080 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	FUT2	Q10981	343 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	SEMA3F	Q13275	785 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	AP3B2	Q13367	1082 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	IKBKE	Q14164	716 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	ERICH6B	Q5W0A0	696 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	PPP2R2D	Q66LE6	453 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	WWC2	Q6AWC2	1192 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	CNTNAP5	Q8WYK1	1306 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	DHX38	Q92620	1227 aa	Known RBP	13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	NRCAM	Q92823	1304 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	TCEANC2	Q96MN5	208 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	NKX2-4	Q9H2Z4	354 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	SNX14	Q9Y5W7	946 aa		13.77	□□□□□ -0.21
RNF25-205	ENST00000474339	SMCO2	A6NFE2	343 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	RSPH10B2	B2RC85	870 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	RPLP2	P05387	115 aa	Known RBP	13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	RSPH10B	P0C881	870 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	KCNA2	P16389	499 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	THPO	P40225	353 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	AKAP17A	Q02040	695 aa	Known RBP	13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	UBE2S	Q16763	222 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	PFKFB3	Q16875	520 aa	Predicted RBP	13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	TRIM71	Q2Q1W2	868 aa	Known RBP	13.76	□□□□□ -0.21
RNF25-205	ENST00000474339		Q6ZUG5	572 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	HERC6	Q8IVU3	1022 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	RNPEP	Q9H4A4	650 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	SMARCAD1	Q9H4L7	1026 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	ERAP1	Q9NZ08	941 aa		13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	YBX2	Q9Y2T7	364 aa	Known RBP	13.76	□□□□□ -0.21
RNF25-205	ENST00000474339	STXBP3	O00186	592 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	NBN	O60934	754 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	LGR5	O75473	907 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	RPS6KB1	P23443	525 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	GNA11	P29992	359 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	ADD1	P35611	737 aa	Known RBP	13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	TCF7	P36402	384 aa	Predicted RBP	13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	RABGGTB	P53611	331 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	GPNMB	Q14956	572 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	CEP55	Q53EZ4	464 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	ZNF618	Q5T7W0	954 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	TAF2	Q6P1X5	1199 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	BRF1	Q92994	677 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	MXRA8	Q9BRK3	442 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	SDF4	Q9BRK5	362 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	AGXT2	Q9BYV1	514 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	PRDM12	Q9H4Q4	367 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	BCAS3	Q9H6U6	928 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	C6orf50	Q9HD87	102 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.75	□□□□□ -0.21
RNF25-205	ENST00000474339		A0A0C4DFX4	3053 aa		13.75	□□□□□ -0.21
RNF25-205	ENST00000474339	NFASC	O94856	1347 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	ESYT2	A0FGR8	921 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	PRPF3	O43395	683 aa	Known RBP	13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	EIF5B	O60841	1220 aa	Known RBP	13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	ATP9A	O75110	1047 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	SCG2	P13521	617 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	CDC27	P30260	824 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	EVC	P57679	992 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms