RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 SP2Q02086 613 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 GNL2Q13823 731 aaKnown RBP16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 NEDD9Q14511 834 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 METTL7BQ6UX53 244 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 RNF180Q86T96 592 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 ARRDC4Q8NCT1 418 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 KLHDC9Q8NEP7 349 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
CDC42SE1-203ENST00000470278 NFASCO94856 1347 aa16.96■□□□□ 0.3
CDC42SE1-203ENST00000470278 DOCK5Q9H7D0 1870 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 VCANP13611 3396 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 TDP2O95551 362 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 PGK1P00558 417 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 CPT1AP50416 773 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 LAMC2Q13753 1193 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 LRRC41Q15345 812 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 PRR16Q569H4 304 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 CELF3Q5SZQ8 465 aaKnown RBP16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 CCSAPQ6IQ19 270 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 PLA2G4DQ86XP0 818 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 TDHQ8IZJ6 230 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 OR6J1Q8NGC5 347 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 AGO4Q9HCK5 861 aaKnown RBP16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
CDC42SE1-203ENST00000470278 MOXD2PA6NHM9 499 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 A6NJR5 290 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 GGPS1O95749 300 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 C6orf222P0C671 652 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 ARP10275 920 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 HOXD8P13378 290 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 FSCN1Q16658 493 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 GPR153Q6NV75 609 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 COPS5Q92905 334 aa16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
CDC42SE1-203ENST00000470278 SPTBN5Q9NRC6 3674 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 MYADML2A6NDP7 307 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 STX6O43752 255 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 SLC37A4O43826 429 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 CCNT1O60563 726 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 ATP9AO75110 1047 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 PTGS1P23219 599 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 ITGB3BPQ13352 177 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 BRDTQ58F21 947 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 BRAPQ7Z569 592 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 ETNPPLQ8TBG4 499 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 ZNF577Q9BSK1 485 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 MTMR10Q9NXD2 777 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 CHD9Q3L8U1 2897 aa16.93■□□□□ 0.3
CDC42SE1-203ENST00000470278 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 TBX3O15119 743 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 MSH4O15457 936 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 MMP3P08254 477 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 RIT2Q99578 217 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 SDF4Q9BRK5 362 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 MLXIPQ9HAP2 919 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 JPH1Q9HDC5 661 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 TBC1D22BQ9NU19 505 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 PHF24Q9UPV7 400 aa16.92■□□□□ 0.3
CDC42SE1-203ENST00000470278 WNT7AO00755 349 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 ZEB2O60315 1214 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 KPNA6O60684 536 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 HSDL1Q3SXM5 330 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 GNASQ5JWF2 1037 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 CYFIP1Q7L576 1253 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 AFG1LQ8WV93 481 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 FAM20AQ96MK3 541 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 SPATA33Q96N06 139 aa16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
CDC42SE1-203ENST00000470278 MYH15Q9Y2K3 1946 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 SCN10AQ9Y5Y9 1956 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 NEMFO60524 1076 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 CABYRO75952 493 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 ASGR1P07306 291 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 ACLYP53396 1101 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 BEX3Q00994 111 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 KCNA10Q16322 511 aa16.9■□□□□ 0.3
CDC42SE1-203ENST00000470278 DGKDQ16760 1214 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms