RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MTMR1Q13613 665 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 MORN1Q5T089 497 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 CTU1Q7Z7A3 348 aaKnown RBP14.35□□□□□ -0.11
TRAF4-208ENST00000469529 CABP7Q86V35 215 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 RDM1Q8NG50 284 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 USP6NLQ92738 828 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 HSD17B14Q9BPX1 270 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 ZNF577Q9BSK1 485 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 POLR3CQ9BUI4 534 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-208ENST00000469529 NT5C3AQ9H0P0 336 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 DISC1Q9NRI5 854 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
TRAF4-208ENST00000469529 IVNS1ABPQ9Y6Y0 642 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 NFASCO94856 1347 aa14.35□□□□□ -0.11
TRAF4-208ENST00000469529 A0A087X0B3 334 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 COBLO75128 1261 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 MYCLP12524 364 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-208ENST00000469529 RPA1P27694 616 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 CRHR2Q13324 411 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 EPHA7Q15375 998 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-208ENST00000469529 SPATA20Q8TB22 786 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 CALML4Q96GE6 196 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 CPA4Q9UI42 421 aa14.34□□□□□ -0.11
TRAF4-208ENST00000469529 COL11A1P12107 1806 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-208ENST00000469529 GAS7O60861 476 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 FKTNO75072 461 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 IGHA2P01877 340 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 ADORA2AP29274 412 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 PDE4DQ08499 809 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 TMEM119Q4V9L6 283 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 NAALADL2Q58DX5 795 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 ERMNQ8TAM6 284 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 NEK9Q8TD19 979 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 TEKT3Q9BXF9 490 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 TUFT1Q9NNX1 390 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 KBTBD4Q9NVX7 518 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 KIAA1468Q9P260 1216 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 TUBE1Q9UJT0 475 aa14.33□□□□□ -0.12
TRAF4-208ENST00000469529 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
TRAF4-208ENST00000469529 PGK2P07205 417 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 KCNA2P16389 499 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 CDC25AP30304 524 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 SFNP31947 248 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 SARSP49591 514 aaKnown RBP14.32□□□□□ -0.12
TRAF4-208ENST00000469529 KRT76Q01546 638 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 ITGB3BPQ13352 177 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-208ENST00000469529 ZNF746Q6NUN9 644 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-208ENST00000469529 CNNM4Q6P4Q7 775 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 PNMA5Q96PV4 448 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 SERTAD1Q9UHV2 236 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 GJD2Q9UKL4 321 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 KDM3AQ9Y4C1 1321 aa14.32□□□□□ -0.12
TRAF4-208ENST00000469529 MYH7BA7E2Y1 1941 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 POTEMA6NI47 508 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 PP2D1A8MPX8 630 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 ATP9AO75110 1047 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 SLITRK3O94933 977 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 ATG7O95352 703 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 LYPLA2O95372 231 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 CAVIN2O95810 425 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 SPATA31C1P0DKV0 1188 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 XRCC6P12956 609 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAF4-208ENST00000469529 GRB10Q13322 594 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 NEDD9Q14511 834 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
TRAF4-208ENST00000469529 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 LRSAM1Q6UWE0 723 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 CATSPER3Q86XQ3 398 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 SMAP1Q8IYB5 467 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-208ENST00000469529 CEP57L1Q8IYX8 460 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 NUDT12Q9BQG2 462 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 FUCA2Q9BTY2 467 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 LRRC27Q9C0I9 530 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 SYNGAP1Q96PV0 1343 aa14.31□□□□□ -0.12
TRAF4-208ENST00000469529 EML1O00423 815 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 P4HBP07237 508 aaKnown RBP14.3□□□□□ -0.12
TRAF4-208ENST00000469529 XRCC5P13010 732 aaKnown RBP14.3□□□□□ -0.12
TRAF4-208ENST00000469529 JAK3P52333 1124 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 AMPD3Q01432 767 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 MAP2K5Q13163 448 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
TRAF4-208ENST00000469529 CAMK4Q16566 473 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 CCDC62Q6P9F0 684 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 DPP9Q86TI2 863 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 PDILTQ8N807 584 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 SNX29Q8TEQ0 813 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms