RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SPATA31C2B4DYI2 1134 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 FIBPO43427 364 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 GGPS1O95749 300 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 XBP1P17861 261 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 ICAM3P32942 547 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 SP2Q02086 613 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 ARHGAP1Q07960 439 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
RFX3-210ENST00000457373 MCTP2Q6DN12 878 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 BLIDQ8IZY5 108 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 REXO1Q8N1G1 1221 aaKnown RBP11.51□□□□□ -0.57
RFX3-210ENST00000457373 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
RFX3-210ENST00000457373 BCAS3Q9H6U6 928 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
RFX3-210ENST00000457373 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 PKD2L1Q9P0L9 805 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 UBIAD1Q9Y5Z9 338 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 HTTP42858 3142 aa11.51□□□□□ -0.57
RFX3-210ENST00000457373 A6NJR5 290 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 TGFB3P10600 412 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 ITGB5P18084 799 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 UBA1P22314 1058 aaKnown RBP11.5□□□□□ -0.57
RFX3-210ENST00000457373 CHMP4BP1P59074 171 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 PSMC6P62333 389 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 LAMC2Q13753 1193 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 TRIM60Q495X7 471 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 CELF3Q5SZQ8 465 aaKnown RBP11.5□□□□□ -0.57
RFX3-210ENST00000457373 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 GPRASP2Q96D09 838 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 MXRA8Q9BRK3 442 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 PHF20Q9BVI0 1012 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 JADE2Q9NQC1 790 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 ZMYND8Q9ULU4 1186 aaPredicted RBP11.5□□□□□ -0.57
RFX3-210ENST00000457373 NR2E3Q9Y5X4 410 aa11.5□□□□□ -0.57
RFX3-210ENST00000457373 A0A0U1RQG5 324 aaPredicted RBP11.49□□□□□ -0.57
RFX3-210ENST00000457373 ATP9AO75110 1047 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 CABYRO75952 493 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
RFX3-210ENST00000457373 MMP3P08254 477 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 ARP10275 920 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 SYN1P17600 705 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 FECHP22830 423 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 SREBF1P36956 1147 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 ARHGAP4P98171 946 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 PURAQ00577 322 aaKnown RBP11.49□□□□□ -0.57
RFX3-210ENST00000457373 SP4Q02446 784 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 MTMR1Q13613 665 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 NEDD9Q14511 834 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 HSDL1Q3SXM5 330 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 MYSM1Q5VVJ2 828 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 CYFIP1Q7L576 1253 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 CYP2W1Q8TAV3 490 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 PPP1R13LQ8WUF5 828 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 ELP1O95163 1332 aa11.49□□□□□ -0.57
RFX3-210ENST00000457373 H0YGN5 161 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 ARVCFO00192 962 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 KPNA6O60684 536 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 CYP3A4P08684 503 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 TLE2Q04725 743 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 TRIM29Q14134 588 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 SNX17Q15036 470 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 NPY5RQ15761 445 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 GALNT17Q6IS24 598 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 FAM177A1Q8N128 213 aaPredicted RBP11.48□□□□□ -0.57
RFX3-210ENST00000457373 FAM184AQ8NB25 1140 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 DAGLBQ8NCG7 672 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 TBCKQ8TEA7 893 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 TMX3Q96JJ7 454 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 CDHR1Q96JP9 859 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 UIMC1Q96RL1 719 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 LLPHQ9BRT6 129 aaKnown RBP11.48□□□□□ -0.57
RFX3-210ENST00000457373 MTG1Q9BT17 334 aaPredicted RBP11.48□□□□□ -0.57
RFX3-210ENST00000457373 PCDH10Q9P2E7 1040 aa11.48□□□□□ -0.57
RFX3-210ENST00000457373 FAM86B1E9PN63 330 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 M0R2N6 131 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 NOP56O00567 594 aaKnown RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 MAFGO15525 162 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 PQBP1O60828 265 aaKnown RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 FAM86B2P0C5J1 330 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 KCNA2P16389 499 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 MCM2P49736 904 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 CDK7P50613 346 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 GUCY1B3Q02153 619 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 HIC1Q14526 733 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 NONOQ15233 471 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFX3-210ENST00000457373 DGKDQ16760 1214 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 UTP14CQ5TAP6 766 aaKnown RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 KRT40Q6A162 431 aa11.47□□□□□ -0.57
RFX3-210ENST00000457373 GIMAP8Q8ND71 665 aaPredicted RBP11.47□□□□□ -0.57
RFX3-210ENST00000457373 PPTC7Q8NI37 304 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms