RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZSCAN12O43309 604 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 FECHP22830 423 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 PABPC4Q13310 644 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMC6-206ENST00000446852 MIIPQ5JXC2 388 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 RAD9BQ6WBX8 426 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 CLEC4DQ8WXI8 215 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 SLC5A5Q92911 643 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
SMC6-206ENST00000446852 ABHD10Q9NUJ1 306 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 TBC1D7Q9P0N9 293 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 COL20A1Q9P218 1284 aa19.42■□□□□ 0.7
SMC6-206ENST00000446852 PSMD10O75832 226 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 TRIM14Q14142 442 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 CEP55Q53EZ4 464 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 SYT10Q6XYQ8 523 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 OTOP1Q7RTM1 612 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 MYOCDQ8IZQ8 938 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 CCDC51Q96ER9 411 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 NAA15Q9BXJ9 866 aaKnown RBP19.41■□□□□ 0.7
SMC6-206ENST00000446852 RGL1Q9NZL6 768 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 FRMD3A2A2Y4 597 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 TPM1P09493 284 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
SMC6-206ENST00000446852 MTIF2P46199 727 aaKnown RBP19.41■□□□□ 0.7
SMC6-206ENST00000446852 DNM2P50570 870 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 LRRC63Q05C16 580 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 LRCH2Q5VUJ6 765 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 TRIM65Q6PJ69 517 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 LRRC55Q6ZSA7 311 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 CCDC65Q8IXS2 484 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 CPXCR1Q8N123 301 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 KIF18AQ8NI77 898 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 ZKSCAN4Q969J2 545 aaPredicted RBP19.41■□□□□ 0.7
SMC6-206ENST00000446852 POLR3CQ9BUI4 534 aaPredicted RBP19.41■□□□□ 0.7
SMC6-206ENST00000446852 EHMT1Q9H9B1 1298 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 SLC38A10Q9HBR0 1119 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 DNM3Q9UQ16 869 aa19.41■□□□□ 0.7
SMC6-206ENST00000446852 FLOT1O75955 427 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 ZCWPW2Q504Y3 356 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 DCAF15Q66K64 600 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 SYT2Q8N9I0 419 aaPredicted RBP19.4■□□□□ 0.7
SMC6-206ENST00000446852 RAVER2Q9HCJ3 691 aaKnown RBP19.4■□□□□ 0.7
SMC6-206ENST00000446852 STK24Q9Y6E0 443 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 PITPNM2Q9BZ72 1349 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 SPP2Q13103 211 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 ZNF112Q9UJU3 913 aa19.4■□□□□ 0.7
SMC6-206ENST00000446852 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.7
SMC6-206ENST00000446852 TTC26A0AVF1 554 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 FANCGO15287 622 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 KRT18P05783 430 aaKnown RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 ARP10275 920 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 PPP2R5CQ13362 524 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 HERC4Q5GLZ8 1057 aaPredicted RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 HSD17B14Q9BPX1 270 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 NOC4LQ9BVI4 516 aaKnown RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 GPRC5DQ9NZD1 345 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 PPP1R9AQ9ULJ8 1098 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 RPTORQ8N122 1335 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 CTIFO43310 598 aaKnown RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 CHMP2AO43633 222 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 ALAS1P13196 640 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 KRT9P35527 623 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 ETF1P62495 437 aaKnown RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 ERVK-24P63145 666 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 GIT2Q14161 759 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 APOBEC3FQ8IUX4 373 aaKnown RBP19.39■□□□□ 0.69
SMC6-206ENST00000446852 WRNIP1Q96S55 665 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 REEP2Q9BRK0 252 aa19.39■□□□□ 0.69
SMC6-206ENST00000446852 SSC5DA1L4H1 1573 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 KLK7P49862 253 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 FOXR2Q6PJQ5 311 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 IL31RAQ8NI17 732 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 BHMT2Q9H2M3 363 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 HOMER2Q9NSB8 354 aa19.38■□□□□ 0.69
SMC6-206ENST00000446852 RASSF10A6NK89 507 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 GHRHRQ02643 423 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 TBC1D8BQ0IIM8 1120 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
SMC6-206ENST00000446852 SCFD1Q8WVM8 642 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 TTYH3Q9C0H2 523 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 MRPL44Q9H9J2 332 aaKnown RBP19.37■□□□□ 0.69
SMC6-206ENST00000446852 GGA3Q9NZ52 723 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 ADGRG1Q9Y653 693 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 GAS7O60861 476 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 SLITRK3O94933 977 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 ITGB5P18084 799 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 PTPRAP18433 802 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 BACE1P56817 501 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 SYCP1Q15431 976 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 DYDC2Q96IM9 177 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 WNK4Q96J92 1243 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 ZNF577Q9BSK1 485 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 LOXHD1Q8IVV2 1947 aa19.37■□□□□ 0.69
SMC6-206ENST00000446852 HIRAP54198 1017 aaPredicted RBP19.36■□□□□ 0.69
SMC6-206ENST00000446852 USP14P54578 494 aa19.36■□□□□ 0.69
SMC6-206ENST00000446852 SETQ01105 290 aaPredicted RBP19.36■□□□□ 0.69
SMC6-206ENST00000446852 TSG101Q99816 390 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms