RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ICAM1P05362 532 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 ACTN2P35609 894 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PPATQ06203 517 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 GMCL1Q96IK5 515 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 TMX1Q9H3N1 280 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PPP1R9AQ9ULJ8 1098 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PTPREP23469 700 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 GJC1P36383 396 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 ZFPM1Q8IX07 1006 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 LMBR1Q8WVP7 490 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 JPH1Q9HDC5 661 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 FAM198AQ9UFP1 575 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 RGS2P41220 211 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PSMC5P62195 406 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PLEKHH3Q7Z736 793 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 CCDC117Q8IWD4 279 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 DYDC2Q96IM9 177 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 CPA4Q9UI42 421 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 AKR1B15C9JRZ8 316 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 MMS19Q96T76 1030 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 MROH8Q9H579 483 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 JADE2Q9NQC1 790 aa15.51■□□□□ 0.07
SMARCA4-204ENST00000444061 RHBDL3P58872 404 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 SCFD2Q8WU76 684 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 MAPK4P31152 587 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 RPS6P62753 249 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 LRMPQ12912 555 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 MORC3Q14149 939 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 GMCL1P1Q8NEA9 526 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 KBTBD13C9JR72 458 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 PDHXO00330 501 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 EIF3JO75822 258 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 GH1P01241 217 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 GNG11P61952 73 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 LRRC41Q15345 812 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 ASIC2Q16515 512 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 PSPC1Q8WXF1 523 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 KRT86O43790 486 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 TACC1O75410 805 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 ERLIN1O75477 346 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 SKIDA1Q1XH10 827 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 PADI6Q6TGC4 694 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-204ENST00000444061 CNTNAP5Q8WYK1 1306 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 CCDC175P0C221 793 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 PEX3P56589 373 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 C1orf112Q9NSG2 853 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 TMEM110-MUSTN1A8MSY1 372 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 ARHGAP44Q17R89 818 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 ZNF541Q9H0D2 1346 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 SETD1AO15047 1707 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 STXBP3O00186 592 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 NR2F2P24468 414 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 STAT5BP51692 787 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 ALCAMQ13740 583 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 RARBP10826 455 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 HERVK_113P62684 666 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 VGLL4Q14135 290 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 EPHA7Q15375 998 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 CYFIP1Q7L576 1253 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 NACA2Q9H009 215 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 GBP3Q9H0R5 595 aa15.49■□□□□ 0.07
SMARCA4-204ENST00000444061 SNW1Q13573 536 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 FZD1Q9UP38 647 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 PCDHAC2Q9Y5I4 1007 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 KCNJ18B7U540 433 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 KCNJ12Q14500 433 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 SMC1AQ14683 1233 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 XRRA1Q6P2D8 792 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 SEPT1Q8WYJ6 367 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 LXNQ9BS40 222 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 H0YHG0 523 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 KRT9P35527 623 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 PHKA2P46019 1235 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 GRAMD1CQ8IYS0 662 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 UBXN4Q92575 508 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 CCDC94Q9BW85 323 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 TAF1DQ9H5J8 278 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 FAM207AQ9NSI2 230 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 POTEB3A0JP26 581 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 POTECB2RU33 542 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 LIN9Q5TKA1 542 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 POTEBQ6S5H4 581 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 GBP6Q6ZN66 633 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 CALCOCO1Q9P1Z2 691 aa15.48■□□□□ 0.07
SMARCA4-204ENST00000444061 SLC9C1Q4G0N8 1177 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms