RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CHRNEQ04844 493 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 CHAF1AQ13111 956 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 COBLL1Q53SF7 1204 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 DNAJC21Q5F1R6 531 aaKnown RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 MEI1Q5TIA1 1274 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 NLRX1Q86UT6 975 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 SIRT2Q8IXJ6 389 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 ANKS4BQ8N8V4 417 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 TEX19Q8NA77 164 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 FAM13CQ8NE31 585 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 APPL2Q8NEU8 664 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 GABPB2Q8TAK5 448 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZFPM2Q8WW38 1151 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 FRAT1Q92837 279 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 DACT3Q96B18 629 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZBTB9Q96C00 473 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZNF496Q96IT1 587 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 RPAP3Q9H6T3 665 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 AS3MTQ9HBK9 375 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 EPB41L4AQ9HCS5 686 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 TYW1Q9NV66 732 aaKnown RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 PGAP2Q9UHJ9 254 aa5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 MBD1Q9UIS9 605 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P9-201ENST00000441799 DIP2BQ9P265 1576 aa5.46□□□□□ -1.53
HMGB3P9-201ENST00000441799 GTPBP10A4D1E9 387 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 F8VZ95 297 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 PLIN1O60240 522 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 MMEP08473 750 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 HARSP12081 509 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 PI3P19957 117 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 ADCY2Q08462 1091 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 NFIXQ14938 502 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 KRT72Q14CN4 511 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 SEPT7Q16181 437 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 AGAP9Q5VTM2 703 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCBE1Q6UXH8 406 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 SYNE3Q6ZMZ3 975 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCDC91Q7Z6B0 441 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 DAAM2Q86T65 1068 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 C11orf74Q86VG3 221 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 SUGP1Q8IWZ8 645 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 SLFN12Q8IYM2 578 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 SH3TC2Q8TF17 1288 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 TNPO1Q92973 898 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 VWCEQ96DN2 955 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 PAWRQ96IZ0 340 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 KREMEN1Q96MU8 473 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 GBP4Q96PP9 640 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 GSDMAQ96QA5 445 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 KMT5AQ9NQR1 393 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 TRMT1Q9NXH9 659 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CWC15Q9P013 229 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CLIP2Q9UDT6 1046 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 ZMAT5Q9UDW3 170 aaKnown RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 PCSK1NQ9UHG2 260 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 BARX2Q9UMQ3 279 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 MAPKBP1O60336 1514 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CLIP1P30622 1438 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 CEP170Q5SW79 1584 aa5.46□□□□□ -1.54
HMGB3P9-201ENST00000441799 FAM221AA4D161 298 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 IQCA1LA6NCM1 817 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 CHURC1-FNTBB4DL54 471 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 KIF3BO15066 747 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 CILPO75339 1184 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 MTRF1O75570 445 aaKnown RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 KRT38O76015 456 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 CDKL5O76039 1030 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 SYN1P17600 705 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 SH3BGRP55822 239 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 SLC7A5Q01650 507 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 GABPB1Q06547 395 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 COX10Q12887 443 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 DUSP4Q13115 394 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 PRPF4BQ13523 1007 aaKnown RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 PDCD2Q16342 344 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 SKOR2Q2VWA4 1001 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 WWC2Q6AWC2 1192 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 BNC2Q6ZN30 1099 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 USHBP1Q8N6Y0 703 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 NACC2Q96BF6 587 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 TBC1D20Q96BZ9 403 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 SERINC2Q96SA4 455 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 BAG1Q99933 345 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 FAM167BQ9BTA0 163 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 MAK16Q9BXY0 300 aaKnown RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 UNC45AQ9H3U1 944 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 ZSWIM4Q9H7M6 989 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 IRAK4Q9NWZ3 460 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 MKS1Q9NXB0 559 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 C6orf203Q9P0P8 240 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 N6AMT1Q9Y5N5 214 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 PRR36Q9H6K5 1346 aa5.45□□□□□ -1.54
HMGB3P9-201ENST00000441799 FSD2A1L4K1 749 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 OR14I1A6ND48 311 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 OTOL1A6NHN0 477 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms