RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 PKD2L1Q9P0L9 805 aa23.76■■□□□ 1.39
VPS13B-204ENST00000441350 NR1I2O75469 434 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 TGFB3P10600 412 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 XRCC5P13010 732 aaKnown RBP23.75■■□□□ 1.39
VPS13B-204ENST00000441350 CYP2B6P20813 491 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 FBXO16Q8IX29 292 aaPredicted RBP23.75■■□□□ 1.39
VPS13B-204ENST00000441350 FMR1NBQ8N0W7 255 aaPredicted RBP23.75■■□□□ 1.39
VPS13B-204ENST00000441350 SENP7Q9BQF6 1050 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 MMTAG2Q9BU76 263 aaKnown RBP23.75■■□□□ 1.39
VPS13B-204ENST00000441350 TEKT3Q9BXF9 490 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 VTA1Q9NP79 307 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 FLRT1Q9NZU1 646 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 KCNH3Q9ULD8 1083 aa23.75■■□□□ 1.39
VPS13B-204ENST00000441350 UBA7P41226 1012 aa23.74■■□□□ 1.39
VPS13B-204ENST00000441350 CD99L2Q8TCZ2 262 aa23.74■■□□□ 1.39
VPS13B-204ENST00000441350 GABRQQ9UN88 632 aa23.74■■□□□ 1.39
VPS13B-204ENST00000441350 NFASCO94856 1347 aa23.74■■□□□ 1.39
VPS13B-204ENST00000441350 FKTNO75072 461 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 FLT3LGP49771 235 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 SP2Q02086 613 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 KCNV1Q6PIU1 500 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 BEGAINQ9BUH8 593 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 UNC45AQ9H3U1 944 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 WBP1LQ9NX94 342 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 A0A087X0B3 334 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 RBM47A0AV96 593 aaKnown RBP23.73■■□□□ 1.39
VPS13B-204ENST00000441350 EML1O00423 815 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 SYKP43405 635 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 CCL14Q16627 93 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 TAPT1Q6NXT6 567 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 CCDC62Q6P9F0 684 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 CABP7Q86V35 215 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 DACT1Q9NYF0 836 aa23.73■■□□□ 1.39
VPS13B-204ENST00000441350 CASP8AP2Q9UKL3 1982 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 TXLNAP40222 546 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 PRKCZQ05513 592 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 NCAPH2Q6IBW4 605 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 ZNF296Q8WUU4 475 aaPredicted RBP23.72■■□□□ 1.39
VPS13B-204ENST00000441350 ERO1AQ96HE7 468 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 SDF4Q9BRK5 362 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 ABHD16BQ9H3Z7 469 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 BCAS3Q9H6U6 928 aa23.72■■□□□ 1.39
VPS13B-204ENST00000441350 DDX41Q9UJV9 622 aaKnown RBP23.72■■□□□ 1.39
VPS13B-204ENST00000441350 ZNF202O95125 648 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 ARIH2O95376 493 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 GNRH1P01148 92 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 IRF5Q13568 498 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 SCFD2Q8WU76 684 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 PDGFCQ9NRA1 345 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 DOCK5Q9H7D0 1870 aa23.71■■□□□ 1.39
VPS13B-204ENST00000441350 DDX39AO00148 427 aaKnown RBP23.7■■□□□ 1.39
VPS13B-204ENST00000441350 POLR2DO15514 142 aaKnown RBP23.7■■□□□ 1.39
VPS13B-204ENST00000441350 SLC26A4O43511 780 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 UBA1P22314 1058 aaKnown RBP23.7■■□□□ 1.39
VPS13B-204ENST00000441350 KRT76Q01546 638 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 KRT79Q5XKE5 535 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 GIMAP8Q8ND71 665 aaPredicted RBP23.7■■□□□ 1.39
VPS13B-204ENST00000441350 PANK2Q9BZ23 570 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 SRRDQ9UH36 339 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 STK24Q9Y6E0 443 aa23.7■■□□□ 1.39
VPS13B-204ENST00000441350 CEP350Q5VT06 3117 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 CHMP2AO43633 222 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 CCNE2O96020 404 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 HOXD10P28358 340 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 ACVR2BQ13705 512 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 NEDD9Q14511 834 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 KARSQ15046 597 aaKnown RBP23.7■■□□□ 1.38
VPS13B-204ENST00000441350 ZNF746Q6NUN9 644 aaPredicted RBP23.7■■□□□ 1.38
VPS13B-204ENST00000441350 PDILTQ8N807 584 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 ERMNQ8TAM6 284 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 SNX29Q8TEQ0 813 aa23.7■■□□□ 1.38
VPS13B-204ENST00000441350 JPH1Q9HDC5 661 aaPredicted RBP23.7■■□□□ 1.38
VPS13B-204ENST00000441350 DDX19AQ9NUU7 478 aaKnown RBP23.7■■□□□ 1.38
VPS13B-204ENST00000441350 TTLL4Q14679 1199 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 EPHA7Q15375 998 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 E2F4Q16254 413 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 LY6KQ17RY6 165 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 HYIQ5T013 277 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 TIGD1Q96MW7 591 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 HSD17B14Q9BPX1 270 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 DISC1Q9NRI5 854 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 SLC9A2Q9UBY0 812 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 CCDC39Q9UFE4 941 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 TSKSQ9UJT2 592 aa23.69■■□□□ 1.38
VPS13B-204ENST00000441350 KINO60870 393 aaKnown RBP23.68■■□□□ 1.38
VPS13B-204ENST00000441350 CYP2C19P33261 490 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 GRB10Q13322 594 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 HAUS3Q68CZ6 603 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 CYFIP1Q7L576 1253 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 RDM1Q8NG50 284 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 PNMA5Q96PV4 448 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 EIF2AK1Q9BQI3 630 aaKnown RBP23.68■■□□□ 1.38
VPS13B-204ENST00000441350 PYM1Q9BRP8 204 aaKnown RBP23.68■■□□□ 1.38
VPS13B-204ENST00000441350 POLR3CQ9BUI4 534 aaPredicted RBP23.68■■□□□ 1.38
VPS13B-204ENST00000441350 TMEM63CQ9P1W3 806 aa23.68■■□□□ 1.38
VPS13B-204ENST00000441350 FARP2O94887 1054 aaPredicted RBP23.67■■□□□ 1.38
VPS13B-204ENST00000441350 SPATA31C1P0DKV0 1188 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 TXNP10599 105 aaKnown RBP23.67■■□□□ 1.38
VPS13B-204ENST00000441350 RPA1P27694 616 aa23.67■■□□□ 1.38
VPS13B-204ENST00000441350 SFNP31947 248 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms