RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 V9GY48 417 aaPredicted RBP21.22■□□□□ 0.99
NUP50-207ENST00000424634 H3BRB1 525 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 ATP9AO75110 1047 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 HMGB1P09429 215 aaKnown RBP21.21■□□□□ 0.99
NUP50-207ENST00000424634 SELPP16109 830 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 ITGB5P18084 799 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 PTK7Q13308 1070 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 TRAF7Q6Q0C0 670 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 CCDC155Q8N6L0 562 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 SENP7Q9BQF6 1050 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 FTOQ9C0B1 505 aaKnown RBP eCLIP21.21■□□□□ 0.99
NUP50-207ENST00000424634 TUT1Q9H6E5 874 aaKnown RBP21.21■□□□□ 0.99
NUP50-207ENST00000424634 PCDHA6Q9UN73 950 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 PCDHA8Q9Y5H6 950 aa21.21■□□□□ 0.99
NUP50-207ENST00000424634 GOLGA8AA7E2F4 631 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 GOLGA8BA8MQT2 603 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 NOP56O00567 594 aaKnown RBP21.2■□□□□ 0.98
NUP50-207ENST00000424634 ATP2A2P16615 1042 aaKnown RBP21.2■□□□□ 0.98
NUP50-207ENST00000424634 Q6ZUG5 572 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 LRRC8DQ7L1W4 858 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 NLRX1Q86UT6 975 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 JAKMIP1Q96N16 626 aaKnown RBP21.2■□□□□ 0.98
NUP50-207ENST00000424634 UBIAD1Q9Y5Z9 338 aa21.2■□□□□ 0.98
NUP50-207ENST00000424634 NBNO60934 754 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 ACTN1P12814 892 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 KCNA2P16389 499 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 HOXC8P31273 242 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 ADD1P35611 737 aaKnown RBP21.19■□□□□ 0.98
NUP50-207ENST00000424634 APOBRQ0VD83 1088 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 TCTN1Q2MV58 587 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 ZNF618Q5T7W0 954 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 USP26Q9BXU7 913 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 RNPEPQ9H4A4 650 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 PRDM12Q9H4Q4 367 aa21.19■□□□□ 0.98
NUP50-207ENST00000424634 PTPRSQ13332 1948 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SPDYE3A6NKU9 549 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 STXBP3O00186 592 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 CXCL10P02778 98 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SMIM10L2AP0DMW4 78 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SMIM10L2BP0DMW5 78 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SP4Q02446 784 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 MBTPS1Q14703 1052 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 TRIM50Q86XT4 487 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 SLC28A3Q9HAS3 691 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 RIC8AQ9NPQ8 531 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 PCDHA11Q9Y5I1 949 aa21.18■□□□□ 0.98
NUP50-207ENST00000424634 VCANP13611 3396 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 RCAN1P53805 252 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 NAPAP54920 295 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 UTP14CQ5TAP6 766 aaKnown RBP21.17■□□□□ 0.98
NUP50-207ENST00000424634 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.17■□□□□ 0.98
NUP50-207ENST00000424634 BRF1Q92994 677 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 JADE2Q9NQC1 790 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
NUP50-207ENST00000424634 CUL9Q8IWT3 2517 aa21.17■□□□□ 0.98
NUP50-207ENST00000424634 C17orf102A2RUQ5 167 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 DLL1O00548 723 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 TREHO43280 583 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 FGD1P98174 961 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 ADGRE1Q14246 886 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 BLOC1S2Q6QNY1 142 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 GIMAP8Q8ND71 665 aaPredicted RBP21.16■□□□□ 0.98
NUP50-207ENST00000424634 CYP2W1Q8TAV3 490 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 PHOSPHO2Q8TCD6 241 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 ATP6V0A1Q93050 837 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 PGBD1Q96JS3 809 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 SETD4Q9NVD3 440 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 BARHL2Q9NY43 387 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 TRANK1O15050 2925 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 KAT6AQ92794 2004 aa21.16■□□□□ 0.98
NUP50-207ENST00000424634 GSTTP1A0A1W2PQM5 241 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 SMCO2A6NFE2 343 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 BAIAP3O94812 1187 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 PARNO95453 639 aaKnown RBP21.15■□□□□ 0.98
NUP50-207ENST00000424634 RPS6KB1P23443 525 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 METAP2P50579 478 aaKnown RBP eCLIP21.15■□□□□ 0.98
NUP50-207ENST00000424634 MTMR1Q13613 665 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 PPP1R18Q6NYC8 613 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 FBXL16Q8N461 479 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 USP38Q8NB14 1042 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 CDHR1Q96JP9 859 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 SLC9A7Q96T83 725 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 AGXT2Q9BYV1 514 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 TMEM260Q9NX78 707 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 PKD2L1Q9P0L9 805 aa21.15■□□□□ 0.98
NUP50-207ENST00000424634 ADAMTS3O15072 1205 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 REC8O95072 547 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 TCF7P36402 384 aaPredicted RBP21.14■□□□□ 0.97
NUP50-207ENST00000424634 THPOP40225 353 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 CLK2P49760 499 aaKnown RBP21.14■□□□□ 0.97
NUP50-207ENST00000424634 ADCY7P51828 1080 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 ADAM17P78536 824 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 CNKSR3Q6P9H4 555 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 HERC6Q8IVU3 1022 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 MXRA8Q9BRK3 442 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 REV3LO60673 3130 aa21.14■□□□□ 0.97
NUP50-207ENST00000424634 hCG_1984214I3L0E3 225 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 MAFGO15525 162 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms