RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 MRPL42Q9Y6G3 142 aaKnown RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 SLC4A4Q9Y6R1 1079 aa7.5□□□□□ -1.21
SDCBP-203ENST00000424270 TRIP12Q14669 1992 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-203ENST00000424270 MICAL3Q7RTP6 2002 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 MINDY4BA8MYZ0 360 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 SORBS3O60504 671 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 SURF6O75683 361 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 TTLL1O95922 423 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 SP9P0CG40 484 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 CAMK1Q14012 370 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 CCDC96Q2M329 555 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 TRIM71Q2Q1W2 868 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 PLPP4Q5VZY2 271 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 RNF207Q6ZRF8 634 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 THNSL1Q8IYQ7 743 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 MORC4Q8TE76 937 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 STAG1Q8WVM7 1258 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 KAT2BQ92831 832 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 API5Q9BZZ5 524 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 POMKQ9H5K3 350 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 ENTPD7Q9NQZ7 604 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 DBNLQ9UJU6 430 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 PCDHB12Q9Y5F1 795 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 SCN10AQ9Y5Y9 1956 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 CFAP47Q6ZTR5 3102 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 DMXL1Q9Y485 3027 aa7.49□□□□□ -1.21
SDCBP-203ENST00000424270 MAP1BP46821 2468 aaKnown RBP7.49□□□□□ -1.21
SDCBP-203ENST00000424270 LOC102724159A0A0B4J2E5 919 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 GOLIM4O00461 696 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 NFIBO00712 420 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 MAP3K13O43283 966 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 GNAI2P04899 355 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 CFHP08603 1231 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 HOXB8P17481 243 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 MCCP23508 829 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 TBC1D8BQ0IIM8 1120 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 PWP2Q15269 919 aaKnown RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 DUSP6Q16828 381 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 SLC30A10Q6XR72 485 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 SERINC5Q86VE9 423 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 GMCL1P1Q8NEA9 526 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 VN1R2Q8NFZ6 395 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 ATRIPQ8WXE1 791 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 SLC39A7Q92504 469 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 ACSF2Q96CM8 615 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF287Q9HBT7 754 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 ARPP21Q9UBL0 812 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 CDH22Q9UJ99 828 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 GMEB2Q9UKD1 530 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 NOB1Q9ULX3 412 aaKnown RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 ZNF292O60281 2723 aa7.48□□□□□ -1.21
SDCBP-203ENST00000424270 EP300Q09472 2414 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-203ENST00000424270 MYO5AQ9Y4I1 1855 aaKnown RBP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 PNMA6EA0A0J9YXQ4 647 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 PRDM1O75626 825 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ARIH2O95376 493 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ICAM1P05362 532 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 DCNP07585 359 aaKnown RBP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 WEE2P0C1S8 567 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 TSPY3P0CV98 308 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 TSPY8P0CW00 308 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 GHRP10912 638 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 NPR3P17342 541 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 TIE1P35590 1138 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 MTHFRP42898 656 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 RARSP54136 660 aaKnown RBP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ITIH3Q06033 890 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ARHGAP1Q07960 439 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 MTX1Q13505 466 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 TDGQ13569 410 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 XRRA1Q6P2D8 792 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 CTR9Q6PD62 1173 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 CMTR2Q8IYT2 770 aaKnown RBP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 ATP8B4Q8TF62 1192 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 CASP10Q92851 521 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 CEP95Q96GE4 821 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.47□□□□□ -1.21
SDCBP-203ENST00000424270 S1PR5Q9H228 398 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 TMEM260Q9NX78 707 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 RAB23Q9ULC3 237 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 PRR12Q9ULL5 1215 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 CA14Q9ULX7 337 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
SDCBP-203ENST00000424270 VPS13AQ96RL7 3174 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-203ENST00000424270 CAND2O75155 1236 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 DGKIO75912 1065 aa7.46□□□□□ -1.22
SDCBP-203ENST00000424270 F2P00734 622 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms