RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SERPING1P05155 500 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 GOLGA8HP0CJ92 632 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 UBLCP1Q8WVY7 318 aaPredicted RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 MIEF2Q96C03 454 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 NOVA2Q9UNW9 492 aaKnown RBP18.32■□□□□ 0.52
NPC1L1-203ENST00000423141 TFAP4Q01664 338 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 SF3A3Q12874 501 aaKnown RBP eCLIP18.31■□□□□ 0.523e-7■■■□□ 16.9
NPC1L1-203ENST00000423141 GRB10Q13322 594 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 SV2BQ7L1I2 683 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 KIRREL3Q8IZU9 778 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 TACO1Q9BSH4 297 aaKnown RBP18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 FRMD3A2A2Y4 597 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 PPP2R2AP63151 447 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 RAPGEF1Q13905 1077 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 SLC18A3Q16572 532 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 DAGLBQ8NCG7 672 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 CARD10Q9BWT7 1032 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 CEP72Q9P209 647 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
NPC1L1-203ENST00000423141 USP17L3A6NCW0 530 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 USP17L4A6NCW7 530 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 TXKP42681 527 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 MAGOHP61326 146 aaKnown RBP18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 UNC13DQ70J99 1090 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 USP17L1Q7RTZ2 530 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 FAM133AQ8N9E0 248 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 MAGOHBQ96A72 148 aaKnown RBP18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 DDX47Q9H0S4 455 aaKnown RBP18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 RREB1Q92766 1687 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 CEP104O60308 925 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 USP17L8P0C7I0 530 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 MECOMQ03112 1051 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 CACNA2D3Q8IZS8 1091 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 MDM1Q8TC05 714 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 ANKS1AQ92625 1134 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 NSUN4Q96CB9 384 aaKnown RBP18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 DYNLL2Q96FJ2 89 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 PNMA5Q96PV4 448 aa18.3■□□□□ 0.52
NPC1L1-203ENST00000423141 CASZ1Q86V15 1759 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 ABCB11O95342 1321 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 GRM4Q14833 912 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 TATDN2Q93075 761 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 CALML4Q96GE6 196 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 C5orf60A6NFR6 353 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 SART1O43290 800 aaKnown RBP18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 LRRC63Q05C16 580 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 RPS6KA1Q15418 735 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 TAF4BQ92750 862 aa18.29■□□□□ 0.52
NPC1L1-203ENST00000423141 DAPK3O43293 454 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 ITGA4P13612 1032 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 KLRK1P26718 216 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 CUL1Q13616 776 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 LARP4BQ92615 738 aaKnown RBP18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 LRRC45Q96CN5 670 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 HVCN1Q96D96 273 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 EDEM3Q9BZQ6 932 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 JAG2Q9Y219 1238 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 KIF4AO95239 1232 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 BIRC3Q13489 604 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 KCNK18Q7Z418 384 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 CCT6BQ92526 530 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 MCM9Q9NXL9 1143 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 AMACRQ9UHK6 382 aa18.28■□□□□ 0.52
NPC1L1-203ENST00000423141 F8W031 263 aaPredicted RBP18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 PAX7P23759 505 aa18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 NAPAP54920 295 aa18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 KLHL30Q0D2K2 578 aa18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 XRCC4Q13426 336 aa18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 FGFBP2Q9BYJ0 223 aa18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
NPC1L1-203ENST00000423141 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 POTEMA6NI47 508 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 TRAF5O00463 557 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 GCFC2P16383 781 aaKnown RBP18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 DRD4P21917 467 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 CPLX4Q7Z7G2 160 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 NEK8Q86SG6 692 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 C3orf20Q8ND61 904 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 TBCKQ8TEA7 893 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 FAM84BQ96KN1 310 aaPredicted RBP18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 LUC7LQ9NQ29 371 aaKnown RBP18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 COL4A3BPQ9Y5P4 624 aa18.27■□□□□ 0.51
NPC1L1-203ENST00000423141 PVALEFA0A1B0GWK0 134 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 RPSAP08865 295 aaKnown RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 PAEPP09466 180 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 PRDX5P30044 214 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms