RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 FOSL2P15408 326 aa24.43■■□□□ 1.5
CPNE1-211ENST00000420363 NEK4P51957 841 aa24.43■■□□□ 1.5
CPNE1-211ENST00000420363 PPIGQ13427 754 aaKnown RBP eCLIP24.43■■□□□ 1.59e-12■■□□□ 11.7
CPNE1-211ENST00000420363 GIMAP8Q8ND71 665 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-211ENST00000420363 ZFP91Q96JP5 570 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-211ENST00000420363 KATNAL1Q9BW62 490 aa24.43■■□□□ 1.5
CPNE1-211ENST00000420363 COL25A1Q9BXS0 654 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-211ENST00000420363 DOCK5Q9H7D0 1870 aa24.43■■□□□ 1.5
CPNE1-211ENST00000420363 PPFIA4O75335 1185 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 F2P00734 622 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 ITGB5P18084 799 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 HSDL1Q3SXM5 330 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 TMEM199Q8N511 208 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 MLXIPQ9HAP2 919 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 JADE2Q9NQC1 790 aa24.42■■□□□ 1.5
CPNE1-211ENST00000420363 PPFIA3O75145 1194 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 MTMR1Q13613 665 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 NBPF20Q3BBV1 942 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 SESTD1Q86VW0 696 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 CRYGNQ8WXF5 182 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 KAT2BQ92831 832 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.41■■□□□ 1.55e-13■■■■■ 64.1
CPNE1-211ENST00000420363 VPS54Q9P1Q0 977 aa24.41■■□□□ 1.5
CPNE1-211ENST00000420363 B4GALT4O60513 344 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 SUPT20HL2P0C7V6 817 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 DNAJB2P25686 324 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 RBM25P49756 843 aaKnown RBP24.4■■□□□ 1.5
CPNE1-211ENST00000420363 PGBD1Q96JS3 809 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 MXRA8Q9BRK3 442 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 PPP1R12CQ9BZL4 782 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 TMEM260Q9NX78 707 aa24.4■■□□□ 1.5
CPNE1-211ENST00000420363 NOP56O00567 594 aaKnown RBP24.39■■□□□ 1.49
CPNE1-211ENST00000420363 CSF2RAP15509 400 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 KCNA2P16389 499 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 ARHGAP4P98171 946 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 CEP55Q53EZ4 464 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 CYFIP1Q7L576 1253 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 NIPA1Q7RTP0 329 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 GTF3C6Q969F1 213 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 C22orf23Q9BZE7 217 aa24.39■■□□□ 1.49
CPNE1-211ENST00000420363 HAS3O00219 553 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 CYP3A4P08684 503 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 ME3Q16798 604 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 TMEM240Q5SV17 173 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 JAKMIP3Q5VZ66 844 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 GALNT17Q6IS24 598 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 C16orf59Q7L2K0 433 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 DAGLBQ8NCG7 672 aa24.38■■□□□ 1.49
CPNE1-211ENST00000420363 ZNF286BP0CG31 522 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 ACRP10323 421 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 GRIN2CQ14957 1233 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 FAM47CQ5HY64 1035 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 TIFAQ96CG3 184 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 KIF2CQ99661 725 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 GPR20Q99678 358 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 TRPV6Q9H1D0 765 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 ZNF576Q9H609 170 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 KCNH7Q9NS40 1196 aa24.37■■□□□ 1.49
CPNE1-211ENST00000420363 TANC1Q9C0D5 1861 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 MEIS1O00470 390 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 CYP2C18P33260 490 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 PSEN2P49810 448 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 MFSD10Q14728 455 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 PSRC1Q6PGN9 363 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-211ENST00000420363 ZNF365Q70YC5 407 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 IL27Q8NEV9 243 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 C16orf70Q9BSU1 422 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 NOC4LQ9BVI4 516 aaKnown RBP24.36■■□□□ 1.49
CPNE1-211ENST00000420363 HIPK3Q9H422 1215 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 UPF2Q9HAU5 1272 aaKnown RBP24.36■■□□□ 1.49
CPNE1-211ENST00000420363 TRMT13Q9NUP7 481 aaKnown RBP24.36■■□□□ 1.49
CPNE1-211ENST00000420363 PCDHA4Q9UN74 947 aa24.36■■□□□ 1.49
CPNE1-211ENST00000420363 NFASCO94856 1347 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 EYSQ5T1H1 3165 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 SORBS3O60504 671 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 ATP9AO75110 1047 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 LARGE1O95461 756 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 CTDNEP1O95476 244 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 LGALS2P05162 132 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 NLRP5P59047 1200 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 SETQ01105 290 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-211ENST00000420363 KIAA0753Q2KHM9 967 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 BCAS3Q9H6U6 928 aa24.35■■□□□ 1.49
CPNE1-211ENST00000420363 ADAMTS3O15072 1205 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 XBP1P17861 261 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 WASF1Q92558 559 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 IL23AQ9NPF7 189 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 GTF2IRD1Q9UHL9 959 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 CDH23Q9H251 3354 aa24.34■■□□□ 1.49
CPNE1-211ENST00000420363 M0R2N6 131 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 CIITAP33076 1130 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 ZNF76P36508 570 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 NPY5RQ15761 445 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 C7orf31Q8N865 590 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 CYP2W1Q8TAV3 490 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 RASGRP4Q8TDF6 673 aa24.33■■□□□ 1.49
CPNE1-211ENST00000420363 MTIF3Q9H2K0 278 aaKnown RBP24.33■■□□□ 1.49
CPNE1-211ENST00000420363 JPH1Q9HDC5 661 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-211ENST00000420363 ZNF215Q9UL58 517 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-211ENST00000420363 LIMCH1Q9UPQ0 1083 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms