RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 FAM86B1E9PN63 330 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 MEIS1O00470 390 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 RGS20O76081 388 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 FAM86B2P0C5J1 330 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 ITGB5P18084 799 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 RGS2P41220 211 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 FLT3LGP49771 235 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
DDB1-202ENST00000414411 SLC39A14Q15043 492 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
DDB1-202ENST00000414411 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 LENG9Q96B70 501 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 TRIM5Q9C035 493 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
DDB1-202ENST00000414411 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 ANO10Q9NW15 660 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 SRRDQ9UH36 339 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 PCDHB6Q9Y5E3 794 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 UBIAD1Q9Y5Z9 338 aa11.23□□□□□ -0.61
DDB1-202ENST00000414411 ASB14A6NK59 587 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 GOLGA6L19H0YKK7 550 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
DDB1-202ENST00000414411 TDP2O95551 362 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 PRKCZQ05513 592 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 LETM2Q2VYF4 491 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 CEP55Q53EZ4 464 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 TTC38Q5R3I4 469 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
DDB1-202ENST00000414411 C4orf32Q8N8J7 132 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 APBA2Q99767 749 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 TINF2Q9BSI4 451 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 FLRT1Q9NZU1 646 aa11.22□□□□□ -0.61
DDB1-202ENST00000414411 B4DLN1 442 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 FOXN1O15353 648 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CCNT1O60563 726 aaKnown RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 STAM2O75886 525 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 SNAI1O95863 264 aaPredicted RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 MYCLP12524 364 aaPredicted RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 ATP2B1P20020 1258 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CYP2B6P20813 491 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CMA1P23946 247 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 HOXD10P28358 340 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CCND2P30279 289 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CDC25BP30305 580 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 IRF5Q13568 498 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 ARHGEF6Q15052 776 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 ZNF174Q15697 407 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 STXBP2Q15833 593 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 Q4G0T1 1027 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 OLFML2BQ68BL8 750 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 ARMCX2Q7L311 632 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 CEP57L1Q8IYX8 460 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 KIAA1524Q8TCG1 905 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 INPP4AQ96PE3 977 aaPredicted RBP11.21□□□□□ -0.61
DDB1-202ENST00000414411 MXRA8Q9BRK3 442 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.61
DDB1-202ENST00000414411 PPP6R2O75170 966 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.62
DDB1-202ENST00000414411 PFKFB1P16118 471 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 PTGS1P23219 599 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 PTPAQ15257 358 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 CCL14Q16627 93 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 NIPA1Q7RTP0 329 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.62
DDB1-202ENST00000414411 C17orf53Q8N3J3 647 aaPredicted RBP11.21□□□□□ -0.62
DDB1-202ENST00000414411 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.62
DDB1-202ENST00000414411 KATNBL1Q9H079 304 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 JADE2Q9NQC1 790 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 PYCARDQ9ULZ3 195 aa11.21□□□□□ -0.62
DDB1-202ENST00000414411 SYNGAP1Q96PV0 1343 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 LRRC37A2A6NM11 1700 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 A0A087WWV3 80 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 SLC37A4O43826 429 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 ZNF202O95125 648 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 MCM7P33993 719 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 PRMT2P55345 433 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 PDE4DQ08499 809 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 OTOP1Q7RTM1 612 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
DDB1-202ENST00000414411 MPHOSPH6Q99547 160 aaKnown RBP11.2□□□□□ -0.62
DDB1-202ENST00000414411 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
DDB1-202ENST00000414411 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
DDB1-202ENST00000414411 MORC2Q9Y6X9 1032 aaPredicted RBP11.2□□□□□ -0.62
DDB1-202ENST00000414411 BECN2A8MW95 431 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 MAFGO15525 162 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 HSPA1AP0DMV8 641 aaKnown RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 HSPA1BP0DMV9 641 aaKnown RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 MARCKSP29966 332 aaPredicted RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 ICAM3P32942 547 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 ZNF76P36508 570 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 PTGDRQ13258 359 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms