RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PHF24Q9UPV7 400 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 Q9Y3F1 56 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 IGLV3-22A0A075B6J6 115 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 TBX3O15119 743 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 EDIL3O43854 480 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 BAG4O95429 457 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 ITGB5P18084 799 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 NCLP19338 710 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 CST5P28325 142 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 GNASQ5JWF2 1037 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 PCSK9Q8NBP7 692 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 TNPO1Q92973 898 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 USP28Q96RU2 1077 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-208ENST00000409531 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 H0YGN5 161 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 WNT7AO00755 349 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 DYNC1LI2O43237 492 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 FIBPO43427 364 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 MARCH6O60337 910 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 YEATS4O95619 227 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 TGFB3P10600 412 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 NASPP49321 788 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 NBR1Q14596 966 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 KCNA10Q16322 511 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 CALCRLQ16602 461 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 LRRC26Q2I0M4 334 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 CCSAPQ6IQ19 270 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 SCFD2Q8WU76 684 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 FERMT2Q96AC1 680 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 TFIP11Q9UBB9 837 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-208ENST00000409531 MOXD2PA6NHM9 499 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 SLC37A4O43826 429 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 ICAM3P32942 547 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 ACLYP53396 1101 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 ATN1P54259 1190 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 IRX5P78411 483 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 PTGDRQ13258 359 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 STK38Q15208 465 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 TMEM63BQ5T3F8 832 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 TLK2Q86UE8 772 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 SLFN12Q8IYM2 578 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 CYP2W1Q8TAV3 490 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 LENG9Q96B70 501 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 FAM20AQ96MK3 541 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 KCNH7Q9NS40 1196 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 CLIC4Q9Y696 253 aa18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 MORC2Q9Y6X9 1032 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-208ENST00000409531 CEP290O15078 2479 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 MYADML2A6NDP7 307 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 NKRFO15226 690 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■□□ 14.7
TSPAN4-208ENST00000409531 CTAGE5O15320 804 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 RGS20O76081 388 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 PRPHP41219 470 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 ATP2C1P98194 919 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 SLC39A14Q15043 492 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 ARL6IP4Q66PJ3 421 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 SEPT14Q6ZU15 432 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 KCNG4Q8TDN1 519 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 ZFP91Q96JP5 570 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 KCNMB3Q9NPA1 279 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
TSPAN4-208ENST00000409531 SPATA31C2B4DYI2 1134 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 IPO5O00410 1097 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 ASGR1P07306 291 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 TXNP10599 105 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 TTLL4Q14679 1199 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 C1orf53Q5VUE5 145 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 C7orf61Q8IZ16 206 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 LINC00301Q8NCQ3 95 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 GIMAP8Q8ND71 665 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 ETNPPLQ8TBG4 499 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 SPATA32Q96LK8 384 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 SENP7Q9BQF6 1050 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 ZNF577Q9BSK1 485 aa18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 FTOQ9C0B1 505 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 COLQQ9Y215 455 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-208ENST00000409531 A0A1W2PQ45 241 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 A0A1W2PQY0 241 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 SPTLC2O15270 562 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 MSH4O15457 936 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 ARP10275 920 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 BEX3Q00994 111 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 SNX17Q15036 470 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 PTPAQ15257 358 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 FSCN1Q16658 493 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 TMEM266Q2M3C6 531 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms