RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ABLIM1O14639 778 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 RNMTO43148 476 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 HIP1RO75146 1068 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 GNAQP50148 359 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 LBRQ14739 615 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 GALNTL6Q49A17 601 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 ANKRD27Q96NW4 1050 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 DUSP9Q99956 384 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 ADAM7Q9H2U9 754 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 LRRC53A6NM62 1247 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 PSMA7O14818 248 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 DAPK3O43293 454 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 GNAZP19086 355 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 ITGA6P23229 1130 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 ADORA1P30542 326 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 HNRNPH3P31942 346 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 DHX9Q08211 1270 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 PTGDRQ13258 359 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 FIGNQ5HY92 759 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 EIF1ADQ8N9N8 165 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 PHC3Q8NDX5 983 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 NGDNQ8NEJ9 315 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 FBF1Q8TES7 1133 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 PICK1Q9NRD5 415 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 DLGAP2Q9P1A6 1054 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 LRRC42Q9Y546 428 aa13.99□□□□□ -0.17
HERC3-203ENST00000407637 RGPD8O14715 1765 aaPredicted RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 MARF1Q9Y4F3 1742 aaKnown RBP13.99□□□□□ -0.17
HERC3-203ENST00000407637 ZAP70P43403 619 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 ZC3H6P61129 1189 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 BNIP1Q12981 228 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 MTA1Q13330 715 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 CRACR2BQ8N4Y2 399 aaPredicted RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 KIFAP3Q92845 792 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 ERGIC2Q96RQ1 377 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 AP1M1Q9BXS5 423 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 KRT23Q9C075 422 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 OCEL1Q9H607 264 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 GPR108Q9NPR9 543 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 PCDHGA4Q9Y5G9 962 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 SMIM23A6NLE4 172 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 SMAPO00193 183 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 HGSO14964 777 aaPredicted RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 SNX3O60493 162 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 SETSIPP0DME0 302 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 RAD23BP54727 409 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 KLC1Q07866 573 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 PLS1Q14651 629 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 RRAGAQ7L523 313 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 APLFQ8IW19 511 aaPredicted RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 BICD1Q96G01 975 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 PBKQ96KB5 322 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 IFT74Q96LB3 600 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 DDX47Q9H0S4 455 aaKnown RBP13.98□□□□□ -0.17
HERC3-203ENST00000407637 TMEM59LQ9UK28 342 aa13.98□□□□□ -0.17
HERC3-203ENST00000407637 PRDM1O75626 825 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 TPP2P29144 1249 aaPredicted RBP13.97□□□□□ -0.17
HERC3-203ENST00000407637 LIFRP42702 1097 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 MEI1Q5TIA1 1274 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 FOXB2Q5VYV0 432 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 LONP2Q86WA8 852 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 MAIP1Q8WWC4 291 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 TMEM165Q9HC07 324 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 hCG_1642624A0A1W2PR95 340 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 KCNK3O14649 394 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 FLOT1O75955 427 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
HERC3-203ENST00000407637 KRT2P35908 639 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
HERC3-203ENST00000407637 MMP13P45452 471 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 TTC38Q5R3I4 469 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 ASRGL1Q7L266 308 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 ZSWIM5Q9P217 1185 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 ZNF232Q9UNY5 417 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 ATP8A1Q9Y2Q0 1164 aa13.97□□□□□ -0.17
HERC3-203ENST00000407637 GBP1P32455 592 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 STAT6P42226 847 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 ATP2C1P98194 919 aaPredicted RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 IL17AQ16552 155 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 PTPROQ16827 1216 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
HERC3-203ENST00000407637 CADPS2Q86UW7 1296 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 FGD4Q96M96 766 aa13.96□□□□□ -0.17
HERC3-203ENST00000407637 DPH5Q9H2P9 285 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms