RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MORC4Q8TE76 937 aa30.91■■■□□ 2.54
CPNE1-203ENST00000397442 TEKT3Q9BXF9 490 aa30.91■■■□□ 2.54
CPNE1-203ENST00000397442 ZNF236Q9UL36 1845 aa30.91■■■□□ 2.54
CPNE1-203ENST00000397442 KANK3Q6NY19 840 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 GAS2L3Q86XJ1 694 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 GRAMD1CQ8IYS0 662 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 RASSF8Q8NHQ8 419 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 CALML4Q96GE6 196 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 MTRQ99707 1265 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 UNC45AQ9H3U1 944 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.9■■■□□ 2.54
CPNE1-203ENST00000397442 SPATA31C2B4DYI2 1134 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 PDE4DQ08499 809 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 PNOCQ13519 176 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 TMEM119Q4V9L6 283 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 CEP57L1Q8IYX8 460 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 PAGE5Q96GU1 130 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 KIAA1468Q9P260 1216 aa30.9■■■□□ 2.54
CPNE1-203ENST00000397442 MCM3APO60318 1980 aa30.89■■■□□ 2.54
CPNE1-203ENST00000397442 LOC102724159A0A0B4J2E5 919 aa30.89■■■□□ 2.54
CPNE1-203ENST00000397442 PWP2Q15269 919 aaKnown RBP30.89■■■□□ 2.54
CPNE1-203ENST00000397442 GNPTABQ3T906 1256 aa30.89■■■□□ 2.54
CPNE1-203ENST00000397442 TBC1D22BQ9NU19 505 aa30.89■■■□□ 2.54
CPNE1-203ENST00000397442 B4DLN1 442 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 SLC26A4O43511 780 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 MED24O75448 989 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 ALDH1A1P00352 501 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 PRR29P0C7W0 189 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 KCNA2P16389 499 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 ICAM3P32942 547 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 CCT6AP40227 531 aaKnown RBP30.88■■■□□ 2.53
CPNE1-203ENST00000397442 GSE1Q14687 1217 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 POSTNQ15063 836 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 CDHR1Q96JP9 859 aa30.88■■■□□ 2.53
CPNE1-203ENST00000397442 SPATA31C1P0DKV0 1188 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 REM2Q8IYK8 340 aaPredicted RBP30.87■■■□□ 2.53
CPNE1-203ENST00000397442 DOCK3Q8IZD9 2030 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 SLC15A5A6NIM6 579 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 DDX39AO00148 427 aaKnown RBP30.87■■■□□ 2.53
CPNE1-203ENST00000397442 CHMP2AO43633 222 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 HAUS3Q68CZ6 603 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 KCNK18Q7Z418 384 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 CATSPER3Q86XQ3 398 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 ERMNQ8TAM6 284 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 MPHOSPH6Q99547 160 aaKnown RBP30.87■■■□□ 2.53
CPNE1-203ENST00000397442 CUEDC2Q9H467 287 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 BLOC1S4Q9NUP1 217 aa30.87■■■□□ 2.53
CPNE1-203ENST00000397442 KDM3AQ9Y4C1 1321 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 RPA1P27694 616 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 AFMP43652 599 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 STAMQ92783 540 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 HSD17B14Q9BPX1 270 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 EIF2AK1Q9BQI3 630 aaKnown RBP30.86■■■□□ 2.53
CPNE1-203ENST00000397442 TUBE1Q9UJT0 475 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 STK24Q9Y6E0 443 aa30.86■■■□□ 2.53
CPNE1-203ENST00000397442 POTEB3A0JP26 581 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 MORN1Q5T089 497 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 POTEBQ6S5H4 581 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 SEPT14Q6ZU15 432 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 CDK5RAP3Q96JB5 506 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 POLR3CQ9BUI4 534 aaPredicted RBP30.85■■■□□ 2.53
CPNE1-203ENST00000397442 KBTBD4Q9NVX7 518 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 STK17AQ9UEE5 414 aa30.85■■■□□ 2.53
CPNE1-203ENST00000397442 HOOK1Q9UJC3 728 aaKnown RBP30.85■■■□□ 2.53
CPNE1-203ENST00000397442 DOCK5Q9H7D0 1870 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 ASB14A6NK59 587 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 SP2Q02086 613 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 ZNF467Q7Z7K2 595 aaPredicted RBP30.84■■■□□ 2.53
CPNE1-203ENST00000397442 NT5C3AQ9H0P0 336 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 BCAS3Q9H6U6 928 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 PCDHA5Q9Y5H7 936 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 NFASCO94856 1347 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 HTRA3P83110 453 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 TYRO3Q06418 890 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 EEPD1Q7L9B9 569 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 SPATA20Q8TB22 786 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 CCDC34Q96HJ3 373 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 RGL1Q9NZL6 768 aa30.84■■■□□ 2.53
CPNE1-203ENST00000397442 DIS3Q9Y2L1 958 aaKnown RBP30.84■■■□□ 2.53
CPNE1-203ENST00000397442 CCNE2O96020 404 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 CASP1P29466 404 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 EPHA7Q15375 998 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 ARMCX2Q7L311 632 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 DPP9Q86TI2 863 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 MAGEF1Q9HAY2 307 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 KIAA1024Q9UPX6 916 aa30.83■■■□□ 2.53
CPNE1-203ENST00000397442 POTEFA5A3E0 1075 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 ECM2O94769 699 aaPredicted RBP30.82■■■□□ 2.52
CPNE1-203ENST00000397442 CCDC192P0DO97 292 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 SARSP49591 514 aaKnown RBP30.82■■■□□ 2.52
CPNE1-203ENST00000397442 VEGFBP49765 207 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 CYP4A11Q02928 519 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 DPYDQ12882 1025 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 NT5DC1Q5TFE4 455 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 POTEGQ6S5H5 508 aa30.82■■■□□ 2.52
CPNE1-203ENST00000397442 A0A087WWV3 80 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 SLITRK3O94933 977 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 CTGFP29279 349 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 SASS6Q6UVJ0 657 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 MAMDC4Q6UXC1 1216 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms