RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ICA1Q05084 483 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 PRKG1Q13976 671 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 HACE1Q8IYU2 909 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 ST13P4Q8IZP2 240 aaPredicted RBP18.62■□□□□ 0.57
SIN3A-203ENST00000394949 DEPTORQ8TB45 409 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 ZNF526Q8TF50 670 aaPredicted RBP18.62■□□□□ 0.57
SIN3A-203ENST00000394949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.62■□□□□ 0.573e-6■■■■■ 50.8
SIN3A-203ENST00000394949 YEATS2Q9ULM3 1422 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 POLR2MP0CAP2 368 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
SIN3A-203ENST00000394949 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 KIAA0825Q8IV33 1275 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
SIN3A-203ENST00000394949 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 MCF2L2Q86YR7 1114 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 AIFM3Q96NN9 605 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 MED14O60244 1454 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 STMN1P16949 149 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 RCN2Q14257 317 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 RPS6KA2Q15349 733 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
SIN3A-203ENST00000394949 UIMC1Q96RL1 719 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 MTA3Q9BTC8 594 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 CEP72Q9P209 647 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 EPS15L1Q9UBC2 864 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 STOML1Q9UBI4 398 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
SIN3A-203ENST00000394949 XDHP47989 1333 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 MIF4GDA9UHW6 222 aaKnown RBP18.61■□□□□ 0.57
SIN3A-203ENST00000394949 RNF8O76064 485 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 PLCG1P19174 1290 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 SRGAP2O75044 1071 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 NR1H3Q13133 447 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 SLC5A4Q9NY91 659 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 EXOC1LA0A1B0GW35 172 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 A0A1W2PQC6 194 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 ASPHQ12797 758 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 OSBPL9Q96SU4 736 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 AP1M1Q9BXS5 423 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 DRC3Q9H069 523 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 KLC4Q9NSK0 619 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 ZBTB1Q9Y2K1 713 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 M0QZ92 97 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 GOLGA8HP0CJ92 632 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 ESRRAP11474 423 aaPredicted RBP18.61■□□□□ 0.57
SIN3A-203ENST00000394949 NXNQ6DKJ4 435 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 MAP7D3Q8IWC1 876 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 ADAMTS1Q9UHI8 967 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
SIN3A-203ENST00000394949 EFCAB6Q5THR3 1501 aa18.61■□□□□ 0.57
SIN3A-203ENST00000394949 MEFVO15553 781 aaPredicted RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 DNAJC8O75937 253 aaPredicted RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 PRPF6O94906 941 aaKnown RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 ALAS1P13196 640 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 LRRC41Q15345 812 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 CDC37Q16543 378 aaPredicted RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 ODR4Q5SWX8 454 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 GPATCH4Q5T3I0 446 aaKnown RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 WDR24Q96S15 920 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 TEKT3Q9BXF9 490 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 PITPNM3Q9BZ71 974 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 SH3GLB2Q9NR46 395 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 MT-ND3P03897 115 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 CNGA1P29973 690 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 PROM2Q8N271 834 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 PALMO75781 387 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 VSNL1P62760 191 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 IPO5O00410 1097 aaKnown RBP18.6■□□□□ 0.57
SIN3A-203ENST00000394949 RINT1Q6NUQ1 792 aa18.6■□□□□ 0.57
SIN3A-203ENST00000394949 WDR17Q8IZU2 1322 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 KRT19P08727 400 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 DYNC1I2Q13409 638 aaKnown RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 SYNGAP1Q96PV0 1343 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 GFPT2O94808 682 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 FGGP02679 453 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 LIG4P49917 911 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.571e-8■■□□□ 11.9
SIN3A-203ENST00000394949 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 TBCKQ8TEA7 893 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 EPC1Q9H2F5 836 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 MRPL47Q9HD33 250 aaKnown RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 SAMD9LQ8IVG5 1584 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 FAM102BQ5T8I3 360 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 PDZD4Q76G19 769 aaPredicted RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 RASGRP4Q8TDF6 673 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 HAUS8Q9BT25 410 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 EFHD1Q9BUP0 239 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 TAF1DQ9H5J8 278 aaPredicted RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
SIN3A-203ENST00000394949 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 KAZNQ674X7 775 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 ZBTB8OSQ8IWT0 167 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 TMEM60Q9H2L4 133 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms