RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KCNA6P17658 529 aa18.49■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ABCF3Q9NUQ8 709 aa18.49■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DCDC2CA8MYV0 355 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 TNFAIP3P21580 790 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 EIF6P56537 245 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DDR1Q08345 913 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 HP1BP3Q5SSJ5 553 aaPredicted RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 BZW1Q7L1Q6 419 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DZIP1Q86YF9 867 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SRRM1Q8IYB3 904 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 TMBIM4Q9HC24 238 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 A8MUI8 341 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 LONP1P36776 959 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 RASSF2P50749 326 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CUL1Q13616 776 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 LAMB3Q13751 1172 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 RCN2Q14257 317 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ERICH1Q86X53 443 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 GLG1Q92896 1179 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 TRIM33Q9UPN9 1127 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CALM1P0DP23 149 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CALM2P0DP24 149 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CALM3P0DP25 149 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DR1Q01658 176 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SEL1L2Q5TEA6 688 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 HHATQ5VTY9 493 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 TLR10Q9BXR5 811 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ETAA1Q9NY74 926 aa18.48■□□□□ 0.55
TRAF3IP1-202ENST00000391993 MYOCDQ8IZQ8 938 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CFAP61Q8NHU2 1237 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 RNF14Q9UBS8 474 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 A0A1W2PQC6 194 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ALDH5A1P51649 535 aaPredicted RBP18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 MIPOL1Q8TD10 442 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 LPIN2Q92539 896 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 RHBDL2Q9NX52 303 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 THAP12O43422 761 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 PAPOLAP51003 745 aaKnown RBP18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ZNF365Q70YC5 407 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DNAJC7Q99615 494 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 PITPNM3Q9BZ71 974 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
TRAF3IP1-202ENST00000391993 GFPT2O94808 682 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DYNLL1P63167 89 aaKnown RBP18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SEMA3FQ13275 785 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 TMED1Q13445 227 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DBN1Q16643 649 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 METTL5Q9NRN9 209 aaKnown RBP18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 DCTN4Q9UJW0 460 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SLC4A7Q9Y6M7 1214 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 STXBP3O00186 592 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 PPFIA2O75334 1257 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ITGA4P13612 1032 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ADAM9Q13443 819 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 MESDQ14696 234 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 PLCB4Q15147 1175 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 FGD4Q96M96 766 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ZFATQ9P243 1243 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 MTUS1Q9ULD2 1270 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ZNF76P36508 570 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SERPINB4P48594 390 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 APBB1IPQ7Z5R6 666 aaPredicted RBP18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 SYCP3Q8IZU3 236 aa18.46■□□□□ 0.55
TRAF3IP1-202ENST00000391993 LRRN2O75325 713 aa18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 EEF2P13639 858 aaKnown RBP18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 NQO1P15559 274 aaKnown RBP18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 LONRF1Q17RB8 773 aa18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 PDCD7Q8N8D1 485 aaKnown RBP18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 TBC1D22AQ8WUA7 517 aa18.46■□□□□ 0.54
TRAF3IP1-202ENST00000391993 FNTAP49354 379 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 PMS2P54278 862 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 COG7P83436 770 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 ZNF844Q08AG5 666 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 SLC29A2Q14542 456 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 HLFQ16534 295 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 TMOD4Q9NZQ9 345 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 USP6P35125 1406 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 STARD3NLO95772 234 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 UBTFL6P0CB48 400 aaPredicted RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 GNAT2P19087 354 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 ITGB3BPQ13352 177 aaPredicted RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 NTRK3Q16288 839 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 MSL3Q8N5Y2 521 aaKnown RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 B4GALNT2Q8NHY0 566 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 DDX27Q96GQ7 796 aaKnown RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 NAF1Q96HR8 494 aaKnown RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 SHBGP04278 402 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 ZCCHC18P0CG32 403 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 TFAP4Q01664 338 aa18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 PDE1CQ14123 709 aaPredicted RBP18.45■□□□□ 0.54
TRAF3IP1-202ENST00000391993 TNIP1Q15025 636 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms