RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GPR85P60893 370 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 IFRD2Q12894 506 aaPredicted RBP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 KIZQ2M2Z5 673 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 HABP4Q5JVS0 413 aaKnown RBP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 PHF19Q5T6S3 580 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 FOXB2Q5VYV0 432 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 ERICH6BQ5W0A0 696 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 CYP4F22Q6NT55 531 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 OTOP3Q7RTS5 596 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 LRRC47Q8N1G4 583 aaKnown RBP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 TTLL11Q8NHH1 800 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 UHMK1Q8TAS1 419 aaKnown RBP5.37□□□□□ -1.55
TRAV40-201ENST00000390467 CLEC4DQ8WXI8 215 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 KCNJ15Q99712 375 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 SPATA9Q9BWV2 254 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 TANGO6Q9C0B7 1094 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 PFDN2Q9UHV9 154 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 TRAF6Q9Y4K3 522 aa5.37□□□□□ -1.55
TRAV40-201ENST00000390467 MROH6A6NGR9 719 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 KRIT1O00522 736 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 PDPK1O15530 556 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 TUSC3Q13454 348 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAV40-201ENST00000390467 ZNF669Q96BR6 464 aaPredicted RBP5.36□□□□□ -1.55
TRAV40-201ENST00000390467 MBD6Q96DN6 1003 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 RBM15Q96T37 977 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAV40-201ENST00000390467 ZFYVE21Q9BQ24 234 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 CROTQ9UKG9 612 aa5.36□□□□□ -1.55
TRAV40-201ENST00000390467 K7ESM1 405 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 B4GALT3O60512 393 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 SOD2P04179 222 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 ITGB3P05106 788 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 C6orf222P0C671 652 aaPredicted RBP5.35□□□□□ -1.55
TRAV40-201ENST00000390467 GNAT1P11488 350 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 COL6A1P12109 1028 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 SSRP1Q08945 709 aaKnown RBP5.35□□□□□ -1.55
TRAV40-201ENST00000390467 RASGRF1Q13972 1273 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 TBC1D10BQ4KMP7 808 aaPredicted RBP5.35□□□□□ -1.55
TRAV40-201ENST00000390467 HHIPL2Q6UWX4 724 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 IFNL3Q8IZI9 196 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 YTHDC1Q96MU7 727 aaKnown RBP5.35□□□□□ -1.55
TRAV40-201ENST00000390467 CLIC6Q96NY7 704 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 TMEM209Q96SK2 561 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 IPPKQ9H8X2 491 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 HSPBP1Q9NZL4 362 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 JAG2Q9Y219 1238 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 INVSQ9Y283 1065 aa5.35□□□□□ -1.55
TRAV40-201ENST00000390467 U2SURPO15042 1029 aaKnown RBP5.34□□□□□ -1.55
TRAV40-201ENST00000390467 MAFKO60675 156 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 IL13P35225 146 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 SERINC3Q13530 473 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 SPATS1Q496A3 300 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 MTERF2Q49AM1 385 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 FAM209AQ5JX71 171 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 DTX3Q8N9I9 347 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 SH3RF2Q8TEC5 729 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 EXOC2Q96KP1 924 aa5.34□□□□□ -1.55
TRAV40-201ENST00000390467 TCRBV5S4A2TA0A5A2 114 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 C9orf118A6NHY6 69 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 PLATP00750 562 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 ADRB1P08588 477 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 FAM153BP0C7A2 387 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 FAHP16930 419 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 ATP2B1P20020 1258 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
TRAV40-201ENST00000390467 RASA3Q14644 834 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 PAN2Q504Q3 1202 aaKnown RBP5.33□□□□□ -1.56
TRAV40-201ENST00000390467 GGNQ86UU5 652 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 TRIM48Q8IWZ4 208 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 LGI4Q8N135 537 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 LCORQ96JN0 433 aaPredicted RBP5.33□□□□□ -1.56
TRAV40-201ENST00000390467 C8orf37Q96NL8 207 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 CD244Q9BZW8 370 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 CCDC113Q9H0I3 377 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 L2HGDHQ9H9P8 463 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 DSEQ9UL01 958 aa5.33□□□□□ -1.56
TRAV40-201ENST00000390467 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 FAM221BA6H8Z2 402 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 FAM47E-STBD1D6RA91 191 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 ACOT7O00154 380 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 NBPF6Q5VWK0 638 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 CD276Q5ZPR3 534 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 VASNQ6EMK4 673 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 PKN3Q6P5Z2 889 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 TRMT10BQ6PF06 316 aaKnown RBP5.32□□□□□ -1.56
TRAV40-201ENST00000390467 BORAQ6PGQ7 559 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.32□□□□□ -1.56
TRAV40-201ENST00000390467 ZBTB38Q8NAP3 1195 aaPredicted RBP5.32□□□□□ -1.56
TRAV40-201ENST00000390467 NBPF4Q96M43 638 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 WRNIP1Q96S55 665 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 SSBP3Q9BWW4 388 aaPredicted RBP5.32□□□□□ -1.56
TRAV40-201ENST00000390467 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
TRAV40-201ENST00000390467 CNOT11Q9UKZ1 510 aaKnown RBP5.32□□□□□ -1.56
TRAV40-201ENST00000390467 CYP1A1P04798 512 aaPredicted RBP5.31□□□□□ -1.56
TRAV40-201ENST00000390467 EPHA5P54756 1037 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 SUMO1P63165 101 aaKnown RBP5.31□□□□□ -1.56
TRAV40-201ENST00000390467 KIAA2012Q0VF49 1180 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms