RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 SLC4A10Q6U841 1118 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 FIBCD1Q8N539 461 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 ANKRD44Q8N8A2 993 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 KCNN1Q92952 543 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 SHDQ96IW2 340 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 MEIS3Q99687 375 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 KCNK12Q9HB15 430 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 CRTAC1Q9NQ79 661 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 RRAGDQ9NQL2 400 aaPredicted RBP4.53□□□□□ -1.68
SMC6-202ENST00000381272 AP5S1Q9NUS5 200 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 ERVK13-1Q9NX77 482 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 SF3B6Q9Y3B4 125 aaKnown RBP4.53□□□□□ -1.68
SMC6-202ENST00000381272 ZNF451Q9Y4E5 1061 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 RGS12O14924 1447 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 TECPR2O15040 1411 aa4.53□□□□□ -1.68
SMC6-202ENST00000381272 MSH6P52701 1360 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 KIF24Q5T7B8 1368 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 TMEM2Q9UHN6 1383 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 A0A087WZG4 1122 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQ45 241 aaPredicted RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQY0 241 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 WTIPA6NIX2 430 aaPredicted RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 SDSP20132 328 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 ERCC5P28715 1186 aaPredicted RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 NOP2P46087 812 aaKnown RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 GALK1P51570 392 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 SLC7A5Q01650 507 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 RAB3GAP1Q15042 981 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 HEATR6Q6AI08 1181 aaKnown RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 GALNT18Q6P9A2 607 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 ZNF605Q86T29 641 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 ANKLE2Q86XL3 938 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 HAUS7Q99871 368 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 TSPYL4Q9UJ04 414 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 GPR55Q9Y2T6 319 aaPredicted RBP4.52□□□□□ -1.69
SMC6-202ENST00000381272 TAF6LQ9Y6J9 622 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 KIF13AQ9H1H9 1805 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 CRB1P82279 1406 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 ADAMTS13Q76LX8 1427 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 ATP10DQ9P241 1426 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 RGPD1P0DJD0 1748 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 FMN2Q9NZ56 1722 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 MAP3K19Q56UN5 1328 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 RTL1A6NKG5 1358 aa4.52□□□□□ -1.69
SMC6-202ENST00000381272 TOPAZ1Q8N9V7 1692 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 OVOS2A0A0J9YW53 1432 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 OR14I1A6ND48 311 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 H0Y8X5 98 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 PEX10O60683 326 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 EFEMP2O95967 443 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 GSTM1P09488 218 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 C1QTNF9P0C862 333 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 TCF3P15923 654 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 USP6P35125 1406 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 CASP7P55210 303 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 POU4F1Q01851 419 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 ADGRF1Q5T601 910 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 OVOS2Q6IE36 1432 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 VPS37DQ86XT2 251 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 RPAP2Q8IXW5 612 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 NAT16Q8N8M0 369 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 RTF1Q92541 710 aaKnown RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 PTPRUQ92729 1446 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 SLC12A9Q9BXP2 914 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 NOL6Q9H6R4 1146 aaKnown RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 ZNF552Q9H707 407 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 WHRNQ9P202 907 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 PCDHB10Q9UN67 800 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 DIS3Q9Y2L1 958 aaKnown RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 PTPRCP08575 1304 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 KIAA0232Q92628 1395 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 NALCNQ8IZF0 1738 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 ETV2O00321 342 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 CBFA2T2O43439 604 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 KRT1P04264 644 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 MED14OSP0DP75 135 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 PNLIPP16233 465 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 ATF4P18848 351 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 GLDCP23378 1020 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 ARL4AP40617 200 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 AMPHP49418 695 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 HSF5Q4G112 596 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 RTP2Q5QGT7 225 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 TSHZ3Q63HK5 1081 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 SLCO6A1Q86UG4 719 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 GAS2L3Q86XJ1 694 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 NGDNQ8NEJ9 315 aaKnown RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 LTV1Q96GA3 475 aaPredicted RBP4.51□□□□□ -1.69
SMC6-202ENST00000381272 ZDHHC15Q96MV8 337 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 TOX2Q96NM4 488 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 GBP4Q96PP9 640 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 PLCD4Q9BRC7 762 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 GBP3Q9H0R5 595 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 GRPEL1Q9HAV7 217 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 CAPN10Q9HC96 672 aa4.51□□□□□ -1.69
SMC6-202ENST00000381272 SETD1BQ9UPS6 1966 aaKnown RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 TCAF2A6NFQ2 919 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 EIF5BO60841 1220 aaKnown RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 SEMA7AO75326 666 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms