RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ARHGAP18Q8N392 663 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 EPAS1Q99814 870 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 UBA6A0AVT1 1052 aaPredicted RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 ZNF75DP51815 510 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 EGFL8Q99944 293 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 E7EWF7 191 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 NDUFB5O43674 189 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 GNA14O95837 355 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 HOXC9P31274 260 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 NME3Q13232 169 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ATXN7L3BQ96GX2 97 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 HOMER3Q9NSC5 361 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 E5RI56 91 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 PRPSAP2O60256 369 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 CCND2P30279 289 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
CHD3-203ENST00000380358 SIX5Q8N196 739 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 TCP11Q8WWU5 503 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
CHD3-203ENST00000380358 DAPK1P53355 1430 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 PLTPP55058 493 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 POLE2P56282 527 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 CACTINQ8WUQ7 758 aaKnown RBP13.41□□□□□ -0.26
CHD3-203ENST00000380358 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 CCDC159P0C7I6 412 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 C2orf54Q08AI8 447 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 FSD1LQ9BXM9 530 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 ARIH2O95376 493 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 MFAP3P55082 362 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 NT5C1BQ96P26 610 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 HPCAL4Q9UM19 191 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 ASIC4Q96FT7 647 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 TNRQ92752 1358 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 ERFP50548 548 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 TUBB4BP68371 445 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 SYCP2LQ5T4T6 812 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 COA7Q96BR5 231 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 WARS2Q9UGM6 360 aaKnown RBP13.41□□□□□ -0.26
CHD3-203ENST00000380358 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
CHD3-203ENST00000380358 SEC24BO95487 1268 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 IRF1P10914 325 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 CAPZA2P47755 286 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 CHMP1BQ7LBR1 199 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 USP28Q96RU2 1077 aa13.41□□□□□ -0.26
CHD3-203ENST00000380358 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
CHD3-203ENST00000380358 RSPH10B2B2RC85 870 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 RSPH10BP0C881 870 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 IFT88Q13099 833 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 NGRNQ9NPE2 291 aaKnown RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 TRPC5Q9UL62 973 aaPredicted RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 HEY1Q9Y5J3 304 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 UBE2SQ16763 222 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 SPON2Q9BUD6 331 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 SKOR1P84550 965 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 BBS9Q3SYG4 887 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 DNAJC24Q6P3W2 148 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 RPF1Q9H9Y2 349 aaKnown RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 TBL3Q12788 808 aaKnown RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 HSP90AA5PQ58FG0 334 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 THNSL1Q8IYQ7 743 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 ULK4Q96C45 1275 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 LZTS2Q9BRK4 669 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 DYRK4Q9NR20 520 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 IBTKQ9P2D0 1353 aaPredicted RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 CTSWP56202 376 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
CHD3-203ENST00000380358 NEK8Q86SG6 692 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 ERLEC1Q96DZ1 483 aa13.4□□□□□ -0.26
CHD3-203ENST00000380358 CHEK2O96017 543 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 OR52Z1P0C646 297 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 GRAMD1BQ3KR37 738 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 KLC3Q6P597 504 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 ELMSAN1Q6PJG2 1045 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 SOS1Q07889 1333 aaPredicted RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 A0A087WWV3 80 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 RPN1P04843 607 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms