RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 DMGDHQ9UI17 866 aaKnown RBP12.1□□□□□ -0.47
BEST1-201ENST00000378043 SSU72P8A0A1W2PR75 194 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 POTECB2RU33 542 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 RBAK-RBAKDNI3L0D1 243 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 AGPSO00116 658 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 NCK2O43639 380 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
BEST1-201ENST00000378043 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 HOXA7P31268 230 aaPredicted RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 ACTN2P35609 894 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 TNNT3P45378 269 aaPredicted RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 ITIH3Q06033 890 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 SELENOOQ9BVL4 669 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 KCTD10Q9H3F6 313 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 KCNMB3Q9NPA1 279 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 RNF40O75150 1001 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 CAPN2P17655 700 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 RASSF7Q02833 373 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 TRIM59Q8IWR1 403 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 GOLGA5Q8TBA6 731 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 AENQ8WTP8 325 aaKnown RBP12.09□□□□□ -0.47
BEST1-201ENST00000378043 FAM204AQ9H8W3 233 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 ATP6V0A2Q9Y487 856 aa12.09□□□□□ -0.47
BEST1-201ENST00000378043 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 CYP11B2P19099 503 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 STAT3P40763 770 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 RAD51AP2Q09MP3 1159 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 CRACR2AQ9BSW2 395 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 CEP72Q9P209 647 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 MED24O75448 989 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 MARSP56192 900 aaKnown RBP12.08□□□□□ -0.48
BEST1-201ENST00000378043 CCDC40Q4G0X9 1142 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 ACBD3Q9H3P7 528 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
BEST1-201ENST00000378043 BUB1O43683 1085 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 MARCH6O60337 910 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 GGCXP38435 758 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 POLR2FP61218 127 aaKnown RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 SPIRE1Q08AE8 756 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 IQCEQ6IPM2 695 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 GPBP1Q86WP2 473 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 ZC3H3Q8IXZ2 948 aaKnown RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 CEP63Q96MT8 703 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 MBOAT7Q96N66 472 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 HYOU1Q9Y4L1 999 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 FRMD3A2A2Y4 597 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 MEIS2O14770 477 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 CYP3A7P24462 503 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 CASP5P51878 434 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 SLC12A3P55017 1021 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 HERC4Q5GLZ8 1057 aaPredicted RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
BEST1-201ENST00000378043 NRXN2Q9P2S2 1712 aa12.07□□□□□ -0.48
BEST1-201ENST00000378043 UTRNP46939 3433 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 A0A0U1RQG5 324 aaPredicted RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 POTEFA5A3E0 1075 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 ONECUT3O60422 494 aaPredicted RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 USP11P51784 963 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 CACNB3P54284 484 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 SLC7A5Q01650 507 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 SLC9C1Q4G0N8 1177 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 TDRD12Q587J7 1177 aaKnown RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 FOXR1Q6PIV2 292 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 HHIPL2Q6UWX4 724 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms