RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GLI1P08151 1106 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 KLRC1P26715 233 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 LRRC63Q05C16 580 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 CCDC84Q86UT8 332 aaPredicted RBP22.49■■□□□ 1.19
CLN5-201ENST00000377453 TBC1D5Q92609 795 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 TSG101Q99816 390 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 COL4A3BPQ9Y5P4 624 aa22.49■■□□□ 1.19
CLN5-201ENST00000377453 ESYT2A0FGR8 921 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 LCA5LO95447 670 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 ZCWPW2Q504Y3 356 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 KCTD16Q68DU8 428 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 FAM133AQ8N9E0 248 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 FAM76AQ8TAV0 307 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 CDK5RAP2Q96SN8 1893 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 PPP1R2P41236 205 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 CARSP49589 748 aaKnown RBP22.48■■□□□ 1.19
CLN5-201ENST00000377453 SEMA3FQ13275 785 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 IFT81Q8WYA0 676 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
CLN5-201ENST00000377453 A0A087X0T9 212 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 RPS6KA5O75582 802 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 FAM228BP0C875 321 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 IQCEQ6IPM2 695 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 C8orf74Q6P047 294 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 ADAMTS1Q9UHI8 967 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 MEIS1O00470 390 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 CASP5P51878 434 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 CCDC70Q6NSX1 233 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 NOX5Q96PH1 765 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 STIM2Q9P246 746 aa22.47■■□□□ 1.19
CLN5-201ENST00000377453 TCP1P17987 556 aaKnown RBP22.46■■□□□ 1.19
CLN5-201ENST00000377453 GUCY2FP51841 1108 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 TTMPQ5BVD1 217 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 HERC4Q5GLZ8 1057 aaPredicted RBP22.46■■□□□ 1.19
CLN5-201ENST00000377453 SFMBT2Q5VUG0 894 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 GPBP1Q86WP2 473 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 NFU1Q9UMS0 254 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 PCDHA12Q9UN75 941 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 ZNF543Q08ER8 600 aa22.46■■□□□ 1.19
CLN5-201ENST00000377453 POTEFA5A3E0 1075 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 KRT14P02533 472 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 POTEIP0CG38 1075 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 IL1R1P14778 569 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 FKBP3Q00688 224 aaKnown RBP22.45■■□□□ 1.19
CLN5-201ENST00000377453 MEX3CQ5U5Q3 659 aaKnown RBP22.45■■□□□ 1.19
CLN5-201ENST00000377453 POTEGQ6S5H5 508 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 POTEEQ6S8J3 1075 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 TBC1D16Q8TBP0 767 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 RAB34Q9BZG1 259 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 RIC8AQ9NPQ8 531 aa22.45■■□□□ 1.19
CLN5-201ENST00000377453 FGFR1OPO95684 399 aaKnown RBP22.45■■□□□ 1.18
CLN5-201ENST00000377453 PAFAH1B1P43034 410 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 CCT5P48643 541 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 CACNB3P54284 484 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 GUCY2DQ02846 1103 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 SLC30A10Q6XR72 485 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 SCFD1Q8WVM8 642 aa22.45■■□□□ 1.18
CLN5-201ENST00000377453 PLA2G4BP0C869 781 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 ATP1A2P50993 1020 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PDIA5Q14554 519 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 ASPRV1Q53RT3 343 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 KRT12Q99456 494 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 IKZF4Q9H2S9 585 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PCDHAC2Q9Y5I4 1007 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.44■■□□□ 1.18
CLN5-201ENST00000377453 PNMA6FA0A0J9YX94 578 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PJA2O43164 708 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 MED24O75448 989 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 NOVP48745 357 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 IRAK1P51617 712 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PSMC6P62333 389 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 GABPAQ06546 454 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 SLC9C1Q4G0N8 1177 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 ZFPM1Q8IX07 1006 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 CERS5Q8N5B7 392 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PSTPIP2Q9H939 334 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 EPB41L5Q9HCM4 733 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 PPFIA4O75335 1185 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 ZNF572Q7Z3I7 529 aaPredicted RBP22.44■■□□□ 1.18
CLN5-201ENST00000377453 ZIM3Q96PE6 472 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 P2RX7Q99572 595 aaKnown RBP22.44■■□□□ 1.18
CLN5-201ENST00000377453 LRRC4BQ9NT99 713 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 CEP72Q9P209 647 aa22.44■■□□□ 1.18
CLN5-201ENST00000377453 GAKO14976 1311 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
CLN5-201ENST00000377453 PLCG2P16885 1265 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 KIAA0753Q2KHM9 967 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 PCDHA2Q9Y5H9 948 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 HEXIM1O94992 359 aaKnown RBP22.43■■□□□ 1.18
CLN5-201ENST00000377453 SNHG28P0DPA3 235 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 SLC9A1P19634 815 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 HSPA1LP34931 641 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 CLK2P49760 499 aaKnown RBP22.43■■□□□ 1.18
CLN5-201ENST00000377453 GNGT1P63211 74 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 KLHL7Q8IXQ5 586 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 CUL5Q93034 780 aa22.43■■□□□ 1.18
CLN5-201ENST00000377453 CCDC43Q96MW1 224 aaKnown RBP22.43■■□□□ 1.18
CLN5-201ENST00000377453 TTLL1O95922 423 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms