RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
MSH5-201ENST00000375703 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 USP17L10C9JJH3 530 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 ZBTB5O15062 677 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 GNA14O95837 355 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 SERPINB2P05120 415 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
MSH5-201ENST00000375703 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
MSH5-201ENST00000375703 KDM3AQ9Y4C1 1321 aa16.06■□□□□ 0.16
MSH5-201ENST00000375703 TLR2O60603 784 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
MSH5-201ENST00000375703 HYIQ5T013 277 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
MSH5-201ENST00000375703 KCTD1Q719H9 257 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 FAM76AQ8TAV0 307 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
MSH5-201ENST00000375703 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
MSH5-201ENST00000375703 STIM2Q9P246 746 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 RSPH14Q9UHP6 348 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 TSKSQ9UJT2 592 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 RIMBP2O15034 1052 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 PLA2G4BP0C869 781 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 HAUS3Q68CZ6 603 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.05■□□□□ 0.16
MSH5-201ENST00000375703 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 BTAF1O14981 1849 aa16.05■□□□□ 0.16
MSH5-201ENST00000375703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 TRIM66O15016 1216 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 EPHB4P54760 987 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 NAP1L4Q99733 375 aaKnown RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
MSH5-201ENST00000375703 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 PCDHA2Q9Y5H9 948 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 TRIM59Q8IWR1 403 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.04■□□□□ 0.16
MSH5-201ENST00000375703 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
MSH5-201ENST00000375703 APBA1Q02410 837 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 ARID5AQ03989 594 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 ADAM9Q13443 819 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 GLE1Q53GS7 698 aaKnown RBP16.03■□□□□ 0.16
MSH5-201ENST00000375703 RASSF4Q9H2L5 321 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
MSH5-201ENST00000375703 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 POTECB2RU33 542 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 PALMO75781 387 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 SHMT1P34896 483 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 MARSP56192 900 aaKnown RBP16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 NAB2Q15742 525 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 EMBQ6PCB8 327 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 SCFD1Q8WVM8 642 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
MSH5-201ENST00000375703 CYP11B2P19099 503 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 EPS15P42566 896 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 RAPGEF1Q13905 1077 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 SLC18A3Q16572 532 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
MSH5-201ENST00000375703 MYH10P35580 1976 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 RAD21O60216 631 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 OPA1O60313 960 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 GYS1P13807 737 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 ADRA2BP18089 450 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 KLHL30Q0D2K2 578 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.16
MSH5-201ENST00000375703 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 ADAMTS1Q9UHI8 967 aa16.02■□□□□ 0.16
MSH5-201ENST00000375703 GOLGA8KD6RF30 607 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms