RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 TEX11Q8IYF3 940 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 WHAMMQ8TF30 809 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 RIOK1Q9BRS2 568 aaKnown RBP15.05■□□□□ -0
MCF2L-204ENST00000375608 TRIM51Q9BSJ1 452 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 PCDHA12Q9UN75 941 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 TTI1O43156 1089 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 GFPT2O94808 682 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 SERPING1P05155 500 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 SCP2P22307 547 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 ZSCAN29Q8IWY8 852 aaPredicted RBP15.05■□□□□ -0
MCF2L-204ENST00000375608 BRIP1Q9BX63 1249 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 CCSER1Q9C0I3 900 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 TAF1DQ9H5J8 278 aaPredicted RBP15.05■□□□□ -0
MCF2L-204ENST00000375608 PTPN22Q9Y2R2 807 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 SNX24Q9Y343 169 aa15.05■□□□□ -0
MCF2L-204ENST00000375608 GOLGA6L10A0A0M3HER8 536 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 RGS16O15492 202 aaPredicted RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 FGGP02679 453 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 RPS8P62241 208 aaKnown RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 PABPC4Q13310 644 aaKnown RBP eCLIP15.04■□□□□ -0
MCF2L-204ENST00000375608 NPY5RQ15761 445 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 MAEAQ7L5Y9 396 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 ERGIC2Q96RQ1 377 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 SFI1A8K8P3 1242 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 PGRMC1O00264 195 aaKnown RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 KIF4AO95239 1232 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 H2AFZP0C0S5 128 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 HSD17B3P37058 310 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 PPP1R2P41236 205 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 UBE4AQ14139 1066 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 NBPF9Q3BBW0 867 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 H2AFVQ71UI9 128 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 ZNF287Q9HBT7 754 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 A0A1B0GUA9 196 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 LRRC14Q15048 493 aa15.04■□□□□ -0
MCF2L-204ENST00000375608 SH3RF3Q8TEJ3 882 aaPredicted RBP15.04■□□□□ -0
MCF2L-204ENST00000375608 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.04■□□□□ -0
MCF2L-204ENST00000375608 LRRC37A3O60309 1634 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 ADCY7P51828 1080 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 RCAN1P53805 252 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 MYO1EQ12965 1108 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 MIIPQ5JXC2 388 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 CCDC63Q8NA47 563 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 ATP8A2Q9NTI2 1148 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 CHORDC1Q9UHD1 332 aaPredicted RBP15.03■□□□□ -0
MCF2L-204ENST00000375608 PNMA2Q9UL42 364 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
MCF2L-204ENST00000375608 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 CHMP2AO43633 222 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 FLOT1O75955 427 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 ITGA4P13612 1032 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
MCF2L-204ENST00000375608 UNC13DQ70J99 1090 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 HVCN1Q96D96 273 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 NUDT12Q9BQG2 462 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 LTN1O94822 1766 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 SLC9A1P19634 815 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 EXOC3L4Q17RC7 722 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 DENND2CQ68D51 928 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 SPATS2Q86XZ4 545 aaKnown RBP15.03■□□□□ -0
MCF2L-204ENST00000375608 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 RSRC1Q96IZ7 334 aaKnown RBP15.03■□□□□ -0
MCF2L-204ENST00000375608 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
MCF2L-204ENST00000375608 LRRN2O75325 713 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 TBCAO75347 108 aaKnown RBP15.02■□□□□ -0
MCF2L-204ENST00000375608 GJC1P36383 396 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 LMBR1Q8WVP7 490 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 NSUN4Q96CB9 384 aaKnown RBP15.02■□□□□ -0
MCF2L-204ENST00000375608 AK8Q96MA6 479 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 BARHL2Q9NY43 387 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 AMFRQ9UKV5 643 aa15.02■□□□□ -0
MCF2L-204ENST00000375608 C6orf229H3BNL8 230 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 OPLAHO14841 1288 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 GCNT3O95395 438 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 FAM107AO95990 144 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 CDC25CP30307 473 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 PPP2R2AP63151 447 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 KCNH2Q12809 1159 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 TBC1D10BQ4KMP7 808 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 PARP10Q53GL7 1025 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 SUGP1Q8IWZ8 645 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 MSL3Q8N5Y2 521 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 CCDC197Q8NCU1 140 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 SEC16BQ96JE7 1060 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 INTS9Q9NV88 658 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 NOC2LQ9Y3T9 749 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 GRIN2DO15399 1336 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 NALCNQ8IZF0 1738 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 USP17L5A8MUK1 530 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 XRCC5P13010 732 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 GLE1Q53GS7 698 aaKnown RBP15.02□□□□□ -0.01
MCF2L-204ENST00000375608 TNFRSF25Q93038 417 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 LRRC27Q9C0I9 530 aa15.02□□□□□ -0.01
MCF2L-204ENST00000375608 CUEDC2Q9H467 287 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms