RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 WFS1O76024 890 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 FGAP02671 866 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 MMP1P03956 469 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 HOXB7P09629 217 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 SRGNP10124 158 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 GM2AP17900 193 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 CACNA2D4Q7Z3S7 1137 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 LMNTD2Q8IXW0 634 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 ANKRD13CQ8N6S4 541 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 LPIN2Q92539 896 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 OPTNQ96CV9 577 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.74
SF3A3-201ENST00000373019 THAP9Q9H5L6 903 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 TMEM59LQ9UK28 342 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 PNMA3Q9UL41 463 aa10.46□□□□□ -0.74
SF3A3-201ENST00000373019 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.74
SF3A3-201ENST00000373019 USO1O60763 962 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 PCK1P35558 622 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 PEX5P50542 639 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 ATP11AP98196 1134 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 NR5A1Q13285 461 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 RILPL1Q5EBL4 403 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 CCDC42Q96M95 316 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 FGD4Q96M96 766 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 TRAPPC9Q96Q05 1148 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 RAB17Q9H0T7 212 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 DMAP1Q9NPF5 467 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 CWC25Q9NXE8 425 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 RNF14Q9UBS8 474 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 KCNJ14Q9UNX9 436 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 MYH6P13533 1939 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 SNX3O60493 162 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 TPBGLP0DKB5 382 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 CALB2P22676 271 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 PRCPP42785 496 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 SPA17Q15506 151 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 ATXN10Q9UBB4 475 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 AXIN2Q9Y2T1 843 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 RBM47A0AV96 593 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 BAG3O95817 575 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 IL2RBP14784 551 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 ACADSP16219 412 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 MMP13P45452 471 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 SFSWAPQ12872 951 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 HLTFQ14527 1009 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■□□ 15.6
SF3A3-201ENST00000373019 APOA5Q6Q788 366 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
SF3A3-201ENST00000373019 UBLCP1Q8WVY7 318 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
SF3A3-201ENST00000373019 NKRFO15226 690 aaKnown RBP eCLIP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PEX11AO75192 247 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PENKP01210 267 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 IGKV5-2P06315 115 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 IARSP41252 1262 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 TRIM29Q14134 588 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 CCDC155Q8N6L0 562 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PROCA1Q8NCQ7 364 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 RNPEPL1Q9HAU8 725 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 SAMD15Q9P1V8 674 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 GDAQ9Y2T3 454 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 LRP6O75581 1613 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 GOLGA6L10A0A0M3HER8 536 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 H7C1D1 291 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PJA2O43164 708 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 BUB1O43683 1085 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 HIP1RO75146 1068 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 RNASE9P60153 205 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 RNASELQ05823 741 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 KRT71Q3SY84 523 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 CYB5R4Q7L1T6 521 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 FITM2Q8N6M3 262 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 MKL1Q969V6 931 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PRMT1Q99873 361 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 CCDC134Q9H6E4 229 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 WDR19Q8NEZ3 1342 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 E7ENQ6 273 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 KIF11P52732 1056 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 RAD23BP54727 409 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 LACTBP83111 547 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 TYW1BQ6NUM6 668 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 TMC3Q7Z5M5 1100 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 OXER1Q8TDS5 423 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
SF3A3-201ENST00000373019 PLAGL2Q9UPG8 496 aa10.44□□□□□ -0.74
SF3A3-201ENST00000373019 SIGLEC16A6NMB1 481 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 F8VZ95 297 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 RNF113AO15541 343 aaKnown RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 GSTT1P30711 240 aa10.43□□□□□ -0.74
SF3A3-201ENST00000373019 HNRNPH3P31942 346 aaKnown RBP10.43□□□□□ -0.74
SF3A3-201ENST00000373019 DNM2P50570 870 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms