RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GH1P01241 217 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 NR3C2P08235 984 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 MYL3P08590 195 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 FGD1P98174 961 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 DNM1Q05193 864 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 ZNF274Q96GC6 653 aaPredicted RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 MYL10Q9BUA6 226 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 ZNF576Q9H609 170 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 RBM28Q9NW13 759 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
COL5A1-202ENST00000371820 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
COL5A1-202ENST00000371820 OPLAHO14841 1288 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 STAM2O75886 525 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 ACRP10323 421 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 CCND2P30279 289 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 CYP2C18P33260 490 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 PURAQ00577 322 aaKnown RBP11.78□□□□□ -0.52
COL5A1-202ENST00000371820 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL5A1-202ENST00000371820 GNPTABQ3T906 1256 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 ZNF365Q70YC5 407 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 PBX4Q9BYU1 374 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 IL23AQ9NPF7 189 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 MRVI1Q9Y6F6 885 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 UMODL1Q5DID0 1318 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
COL5A1-202ENST00000371820 SPTBN5Q9NRC6 3674 aaKnown RBP11.77□□□□□ -0.53
COL5A1-202ENST00000371820 A6NJR5 290 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 GRXCR1A8MXD5 290 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 B4GALT4O60513 344 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 PFKFB2O60825 505 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 TGFB3P10600 412 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.53
COL5A1-202ENST00000371820 PBX2P40425 430 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 RCAN1P53805 252 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
COL5A1-202ENST00000371820 PGM5Q15124 567 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 SLC35G1Q2M3R5 365 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 TMEM63BQ5T3F8 832 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.53
COL5A1-202ENST00000371820 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 SMARCC2Q8TAQ2 1214 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 HERVK_113Q902F9 699 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 KATNAL1Q9BW62 490 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 GDPD2Q9HCC8 539 aa11.77□□□□□ -0.53
COL5A1-202ENST00000371820 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
COL5A1-202ENST00000371820 TCHHQ07283 1943 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 ZBTB43O43298 467 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 ARIH2O95376 493 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 RXRAP19793 462 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 PSMC6P62333 389 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 EXOSC10Q01780 885 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 NFRKBQ6P4R8 1299 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 USP38Q8NB14 1042 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 COPS5Q92905 334 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 LRRC2Q9BYS8 371 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 NAT10Q9H0A0 1025 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 WNT8AQ9H1J5 351 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 EHMT1Q9H9B1 1298 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 SPTLC3Q9NUV7 552 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 CXXC1Q9P0U4 656 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL5A1-202ENST00000371820 GBF1Q92538 1859 aa11.76□□□□□ -0.53
COL5A1-202ENST00000371820 CHD9Q3L8U1 2897 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 hCG_1984214I3L0E3 225 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 TUBB4AP04350 444 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 MMP3P08254 477 aa11.75□□□□□ -0.53
COL5A1-202ENST00000371820 CDC25BP30305 580 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms