RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 SLC30A10Q6XR72 485 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 RIOX2Q8IUF8 465 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 TNS4Q8IZW8 715 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 FBXO40Q9UH90 709 aa13.55□□□□□ -0.24
USF1-203ENST00000368021 GCLCP48506 637 aaPredicted RBP13.54□□□□□ -0.24
USF1-203ENST00000368021 ZNF165P49910 485 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 PLS1Q14651 629 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 Q3C1V9 767 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 GTF3C2Q8WUA4 911 aaPredicted RBP13.54□□□□□ -0.24
USF1-203ENST00000368021 SMARCE1Q969G3 411 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 NAT10Q9H0A0 1025 aaKnown RBP13.54□□□□□ -0.24
USF1-203ENST00000368021 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 BTBD7Q9P203 1132 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
USF1-203ENST00000368021 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 GTPBP6O43824 516 aaPredicted RBP13.53□□□□□ -0.24
USF1-203ENST00000368021 PLCG1P19174 1290 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 COPB2P35606 906 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 DPYDQ12882 1025 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 BAATQ14032 418 aaPredicted RBP13.53□□□□□ -0.24
USF1-203ENST00000368021 FAM110CQ1W6H9 321 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 HYIQ5T013 277 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 OTOP1Q7RTM1 612 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
USF1-203ENST00000368021 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 GSDMAQ96QA5 445 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 SPATC1LQ9H0A9 340 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 PFASO15067 1338 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 AFMP43652 599 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 UBXN2AP68543 259 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 FAM193AP78312 1265 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 PGM5Q15124 567 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 HAUS3Q68CZ6 603 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
USF1-203ENST00000368021 SLC5A5Q92911 643 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 CDK5RAP3Q96JB5 506 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 TAAR1Q96RJ0 339 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 MTRQ99707 1265 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 PDCD2LQ9BRP1 358 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
USF1-203ENST00000368021 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
USF1-203ENST00000368021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.25
USF1-203ENST00000368021 SLC25A27O95847 323 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 ITGB5P18084 799 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 GRB10Q13322 594 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 DPCR1Q3MIW9 517 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 TMEM119Q4V9L6 283 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 C11orf57Q6ZUT1 292 aaPredicted RBP13.52□□□□□ -0.25
USF1-203ENST00000368021 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 GPRC5AQ8NFJ5 357 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.25
USF1-203ENST00000368021 GJA10Q969M2 543 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
USF1-203ENST00000368021 BIN1O00499 593 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 CNMDO75829 334 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 PSMD10O75832 226 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 ERVK-9P63128 1117 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 ERVK-24P63145 666 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 MRPS9P82933 396 aaKnown RBP13.51□□□□□ -0.25
USF1-203ENST00000368021 PPP2R5CQ13362 524 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 MORC3Q14149 939 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 DNERQ8NFT8 737 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 IL31RAQ8NI17 732 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 PNMA5Q96PV4 448 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 RIT2Q99578 217 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 MAN1B1Q9UKM7 699 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 ZSWIM8A7E2V4 1837 aa13.51□□□□□ -0.25
USF1-203ENST00000368021 TNPO2O14787 897 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 FCGRTP55899 365 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 AMPD3Q01432 767 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 IQCB1Q15051 598 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms