RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 PTPN22Q9Y2R2 807 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 TCP11X1B4DZS4 312 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 AGPSO00116 658 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 HNRNPCP07910 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
PACS1-201ENST00000320580 TNFAIP3P21580 790 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 AGAP11Q8TF27 550 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 DTNBP1Q96EV8 351 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 BMP6P22004 513 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 AGBL2Q5U5Z8 902 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 ARHGAP22Q7Z5H3 698 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 DNAJC9Q8WXX5 260 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 DDX12PQ92771 950 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 CENPKQ9BS16 269 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 USP15Q9Y4E8 981 aaPredicted RBP18.07■□□□□ 0.48
PACS1-201ENST00000320580 KDM4FA0A1W2PPD8 638 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 CCDC188H7C350 402 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 GNAT2P19087 354 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 LONP1P36776 959 aaKnown RBP18.07■□□□□ 0.48
PACS1-201ENST00000320580 IFNL3Q8IZI9 196 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
PACS1-201ENST00000320580 SART1O43290 800 aaKnown RBP18.07■□□□□ 0.48
PACS1-201ENST00000320580 THAP12O43422 761 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 FAM210AQ96ND0 272 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 RUNDC3BQ96NL0 473 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 RHBDL2Q9NX52 303 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 RGL1Q9NZL6 768 aa18.07■□□□□ 0.48
PACS1-201ENST00000320580 PPP1R3GB7ZBB8 358 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 CCNT1O60563 726 aaKnown RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 GUCY1A2P33402 732 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 KLK7P49862 253 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 AMPD2Q01433 879 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 PUS3Q9BZE2 481 aaKnown RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 ZNF444Q8N0Y2 327 aaPredicted RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 STAG2Q8N3U4 1231 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 CRB1P82279 1406 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 FGGP02679 453 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 PLEKP08567 350 aaPredicted RBP18.06■□□□□ 0.48
PACS1-201ENST00000320580 DR1Q01658 176 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 LLGL1Q15334 1064 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 MFN1Q8IWA4 741 aa18.06■□□□□ 0.48
PACS1-201ENST00000320580 GRID2IPA4D2P6 1211 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 UBOX5O94941 541 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 ACSL3O95573 720 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 DEUP1Q05D60 604 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 DPYDQ12882 1025 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 UAP1Q16222 522 aaPredicted RBP18.05■□□□□ 0.48
PACS1-201ENST00000320580 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
PACS1-201ENST00000320580 ARHGEF18Q6ZSZ5 1173 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 KCNA3P22001 575 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 IKQ13123 557 aaPredicted RBP18.05■□□□□ 0.48
PACS1-201ENST00000320580 TNKSO95271 1327 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 CCDC65Q8IXS2 484 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 PRCCQ92733 491 aaPredicted RBP18.05■□□□□ 0.48
PACS1-201ENST00000320580 FGFR1OP2Q9NVK5 253 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 PMS2P54278 862 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 CYTH2Q99418 400 aa18.05■□□□□ 0.48
PACS1-201ENST00000320580 MAPK13O15264 365 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 SERPING1P05155 500 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CNGA1P29973 690 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 ICA1Q05084 483 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CETN1Q12798 172 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 INF2Q27J81 1249 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 SPATA21Q7Z572 469 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 TBC1D10CQ8IV04 446 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CEP70Q8NHQ1 597 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 FAM205CA6NFA0 338 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 GHRP10912 638 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 PDE6AP16499 860 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CTNNA2P26232 953 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CAPN12Q6ZSI9 719 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 RNF26Q9BY78 433 aaPredicted RBP18.04■□□□□ 0.48
PACS1-201ENST00000320580 DNAJC17Q9NVM6 304 aaKnown RBP18.04■□□□□ 0.48
PACS1-201ENST00000320580 HPS5Q9UPZ3 1129 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 ARL2BPQ9Y2Y0 163 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 HERC4Q5GLZ8 1057 aaPredicted RBP18.04■□□□□ 0.48
PACS1-201ENST00000320580 ANKRD20A2Q5SQ80 823 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 ANKRD20A1Q5TYW2 823 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 CDKAL1Q5VV42 579 aa18.04■□□□□ 0.48
PACS1-201ENST00000320580 COPS2P61201 443 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 LRRC41Q15345 812 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 ACBD5Q5T8D3 534 aaPredicted RBP18.03■□□□□ 0.48
PACS1-201ENST00000320580 ST13P4Q8IZP2 240 aaPredicted RBP18.03■□□□□ 0.48
PACS1-201ENST00000320580 FAM89AQ96GI7 184 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 CPS1P31327 1500 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 NEURL4Q96JN8 1562 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 TRAPPC3O43617 180 aa18.03■□□□□ 0.48
PACS1-201ENST00000320580 DNAJC8O75937 253 aaPredicted RBP18.03■□□□□ 0.48
PACS1-201ENST00000320580 RASGRP4Q8TDF6 673 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms