RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 MYCNP04198 464 aaPredicted RBP20.28■□□□□ 0.84
CCS-201ENST00000310190 CYP2W1Q8TAV3 490 aa20.28■□□□□ 0.84
CCS-201ENST00000310190 RASGRP4Q8TDF6 673 aa20.28■□□□□ 0.84
CCS-201ENST00000310190 ZFP91Q96JP5 570 aaPredicted RBP20.28■□□□□ 0.84
CCS-201ENST00000310190 GPR20Q99678 358 aa20.28■□□□□ 0.84
CCS-201ENST00000310190 MLXIPQ9HAP2 919 aa20.28■□□□□ 0.84
CCS-201ENST00000310190 AGO4Q9HCK5 861 aaKnown RBP20.28■□□□□ 0.84
CCS-201ENST00000310190 KCNJ14Q9UNX9 436 aa20.28■□□□□ 0.84
CCS-201ENST00000310190 KIAA0355O15063 1070 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 MMP1P03956 469 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 ATN1P54259 1190 aaPredicted RBP20.27■□□□□ 0.84
CCS-201ENST00000310190 TLE2Q04725 743 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCS-201ENST00000310190 TRIM60Q495X7 471 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 Q4G0T1 1027 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 CYFIP1Q7L576 1253 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 FAM126BQ8IXS8 530 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 C16orf70Q9BSU1 422 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 KATNAL1Q9BW62 490 aa20.27■□□□□ 0.84
CCS-201ENST00000310190 DCDC2CA8MYV0 355 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 DHX15O43143 795 aaKnown RBP20.26■□□□□ 0.83
CCS-201ENST00000310190 ATG7O95352 703 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 ARP10275 920 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 HOXC8P31273 242 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 FAAP100Q0VG06 881 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 CUL4AQ13619 759 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 PPP4R3AQ6IN85 833 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 FBXO18Q8NFZ0 1043 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 TBCKQ8TEA7 893 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 PRO3102Q9H379 93 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 BCAS3Q9H6U6 928 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 PDLIM7Q9NR12 457 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 TBC1D22BQ9NU19 505 aa20.26■□□□□ 0.83
CCS-201ENST00000310190 H0YGN5 161 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 MYL3P08590 195 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 GCFC2P16383 781 aaKnown RBP20.25■□□□□ 0.83
CCS-201ENST00000310190 KRT40Q6A162 431 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 PLA2G4DQ86XP0 818 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 SEPT1Q8WYJ6 367 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 NAP1L4Q99733 375 aaKnown RBP20.25■□□□□ 0.83
CCS-201ENST00000310190 BRMS1Q9HCU9 246 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 TBX21Q9UL17 535 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 ATP11BQ9Y2G3 1177 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 LTBP2Q14767 1821 aa20.25■□□□□ 0.83
CCS-201ENST00000310190 LGR5O75473 907 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 CLTBP09497 229 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 KRT2P35908 639 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 ZNF76P36508 570 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 ITGB3BPQ13352 177 aaPredicted RBP20.24■□□□□ 0.83
CCS-201ENST00000310190 NBPF20Q3BBV1 942 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 C7orf61Q8IZ16 206 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 KIF3AQ9Y496 699 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 EMSYQ7Z589 1322 aa20.24■□□□□ 0.83
CCS-201ENST00000310190 IGKV6D-21A0A0A0MT36 114 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 GSTTP1A0A1W2PQM5 241 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 IPO5O00410 1097 aaKnown RBP20.23■□□□□ 0.83
CCS-201ENST00000310190 NOP56O00567 594 aaKnown RBP20.23■□□□□ 0.83
CCS-201ENST00000310190 TLR3O15455 904 aaKnown RBP20.23■□□□□ 0.83
CCS-201ENST00000310190 SUPT20HL2P0C7V6 817 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 BMP8BP34820 402 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 TRIM29Q14134 588 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 OXER1Q8TDS5 423 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 SNX21Q969T3 373 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 VTI1AQ96AJ9 217 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 RIT2Q99578 217 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 GDF15Q99988 308 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 SDF4Q9BRK5 362 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 FOXP1Q9H334 677 aaPredicted RBP20.23■□□□□ 0.83
CCS-201ENST00000310190 JPH1Q9HDC5 661 aaPredicted RBP20.23■□□□□ 0.83
CCS-201ENST00000310190 SLC9A2Q9UBY0 812 aa20.23■□□□□ 0.83
CCS-201ENST00000310190 H3BRB1 525 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 LGALS2P05162 132 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 PSEN2P49810 448 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 ZNF746Q6NUN9 644 aaPredicted RBP20.22■□□□□ 0.83
CCS-201ENST00000310190 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
CCS-201ENST00000310190 SLC5A5Q92911 643 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 C8orf76Q96K31 380 aa20.22■□□□□ 0.83
CCS-201ENST00000310190 TUT1Q9H6E5 874 aaKnown RBP20.22■□□□□ 0.83
CCS-201ENST00000310190 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 TRIM43BA6NCK2 446 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 TBX3O15119 743 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 PSMC6P62333 389 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 RBL2Q08999 1139 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 B3GNT9Q6UX72 402 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
CCS-201ENST00000310190 GTF2IRD1Q9UHL9 959 aa20.21■□□□□ 0.83
CCS-201ENST00000310190 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.21■□□□□ 0.83
CCS-201ENST00000310190 A0A1W2PPC1 479 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 MSH4O15457 936 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 PQBP1O60828 265 aaKnown RBP20.2■□□□□ 0.82
CCS-201ENST00000310190 U2AF2P26368 475 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCS-201ENST00000310190 SLC26A2P50443 739 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 KRT76Q01546 638 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 NR5A1Q13285 461 aa20.2■□□□□ 0.82
CCS-201ENST00000310190 ORC2Q13416 577 aaPredicted RBP20.2■□□□□ 0.82
CCS-201ENST00000310190 MFSD10Q14728 455 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms