RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 EEF2KMTQ96G04 330 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 EXOC1LA0A1B0GW35 172 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 FTCDO95954 541 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 EIF3BP55884 814 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 PPP4R4Q6NUP7 873 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TRAIPQ9BWF2 469 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 MLXIPQ9HAP2 919 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SEPT9Q9UHD8 586 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 CAPN11Q9UMQ6 739 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 MRFAP1Q9Y605 127 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SETD1BQ9UPS6 1966 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 MCF2P10911 925 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 CXCR5P32302 372 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TERB1Q8NA31 727 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SPDYE1Q8NFV5 336 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 ANKRD36BP1Q96IX9 119 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 NDE1Q9NXR1 346 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 CPS1P31327 1500 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 ACTN1P12814 892 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 KRT4P19013 534 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 RBM6P78332 1123 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 FAM178BQ8IXR5 827 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TRIML1Q8N9V2 468 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SUGCTQ9HAC7 445 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 ADGRL2O95490 1459 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 H0YC42 278 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 CFLARO15519 480 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SCG2P13521 617 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TBC1D10BQ4KMP7 808 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 DDX17Q92841 729 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 TRIM11Q96F44 468 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 HAUS4Q9H6D7 363 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 MOCS3O95396 460 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 CTSWP56202 376 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SMYD4Q8IYR2 804 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 CCDC24Q8N4L8 307 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 AS3MTQ9HBK9 375 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 SUCLA2Q9P2R7 463 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 COL4A3BPQ9Y5P4 624 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 ABCC12Q96J65 1359 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 KIF19Q2TAC6 998 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 ATG16L1Q676U5 607 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 KRT80Q6KB66 452 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 LONP1P36776 959 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 BASP1P80723 227 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 DR1Q01658 176 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 PTK2Q05397 1052 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TMEM259Q4ZIN3 620 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 EP400NLQ6ZTU2 488 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 NUDCD3Q8IVD9 361 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 MRPL40Q9NQ50 206 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 H7C1D1 291 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 PGRMC1O00264 195 aaKnown RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 SLC7A5Q01650 507 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 YWHAHQ04917 246 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 SPATA1Q5VX52 437 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 CEP70Q8NHQ1 597 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 FAM193BQ96PV7 902 aaPredicted RBP6□□□□□ -1.45
CPSF2-201ENST00000298875 HACD3Q9P035 362 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 GCNT4Q9P109 453 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 DCDC2Q9UHG0 476 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 ABCA9Q8IUA7 1624 aa6□□□□□ -1.45
CPSF2-201ENST00000298875 TYW5A2RUC4 315 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 E7ENQ6 273 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 BRD1O95696 1058 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 CHGBP05060 677 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 DNAAF3Q8N9W5 541 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 ADPGKQ9BRR6 497 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 PARVBQ9HBI1 364 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 SLC38A10Q9HBR0 1119 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 NDUFA13Q9P0J0 144 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 KIAA1024Q9UPX6 916 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 A2ML1A8K2U0 1454 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 TCOF1Q13428 1488 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 WDR91A4D1P6 747 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 H0YCG3 227 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 GOLGA8HP0CJ92 632 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 POLR2BP30876 1174 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 HOXC8P31273 242 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 PCDHA7Q9UN72 937 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 SH3TC1Q8TE82 1336 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 LRRN2O75325 713 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 TADA3O75528 432 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 HABP4Q5JVS0 413 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 ANGPTL8Q6UXH0 198 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 TESK2Q96S53 571 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 SLC52A2Q9HAB3 445 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 PALMDQ9NP74 551 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 G3BP2Q9UN86 482 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 H0YIN7 160 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 MT-ND3P03897 115 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 OR52Z1P0C646 297 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 ART3Q13508 389 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 EAPPQ56P03 285 aaPredicted RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 LARGE2Q8N3Y3 721 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 CALR3Q96L12 384 aaKnown RBP5.99□□□□□ -1.45
CPSF2-201ENST00000298875 TBC1D23Q9NUY8 699 aa5.99□□□□□ -1.45
CPSF2-201ENST00000298875 BABAM1Q9NWV8 329 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms