RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-201ENST00000262887 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 KLRC1P26715 233 aa16.44■□□□□ 0.22
XRCC1-201ENST00000262887 NAB2Q15742 525 aa16.44■□□□□ 0.22
XRCC1-201ENST00000262887 COBLL1Q53SF7 1204 aa16.44■□□□□ 0.22
XRCC1-201ENST00000262887 CNOT8Q9UFF9 292 aaKnown RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 PPP1R12BO60237 982 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 ATP6V1G2O95670 118 aa16.44■□□□□ 0.22
XRCC1-201ENST00000262887 ECHS1P30084 290 aa16.44■□□□□ 0.22
XRCC1-201ENST00000262887 ELF3P78545 371 aaPredicted RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 RSRC1Q96IZ7 334 aaKnown RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 NOVA2Q9UNW9 492 aaKnown RBP16.44■□□□□ 0.22
XRCC1-201ENST00000262887 ABCB11O95342 1321 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 M0R2N6 131 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 EVX2Q03828 476 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 TAF4BQ92750 862 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 NOD2Q9HC29 1040 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 MYH1P12882 1939 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
XRCC1-201ENST00000262887 PHF20L1A8MW92 1017 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 SLC8A3P57103 927 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 UBLCP1Q8WVY7 318 aaPredicted RBP16.43■□□□□ 0.22
XRCC1-201ENST00000262887 EDEM3Q9BZQ6 932 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 TMEM59LQ9UK28 342 aa16.43■□□□□ 0.22
XRCC1-201ENST00000262887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
XRCC1-201ENST00000262887 TSPY2A6NKD2 308 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 ORC4O43929 436 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 SERPING1P05155 500 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 OR52Z1P0C646 297 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 KIRREL3Q8IZU9 778 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 BAIAP2L1Q9UHR4 511 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
XRCC1-201ENST00000262887 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 CUL5Q93034 780 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 TBC1D31Q96DN5 1066 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
XRCC1-201ENST00000262887 SWAP70Q9UH65 585 aa16.42■□□□□ 0.22
XRCC1-201ENST00000262887 ANKRD33BA6NCL7 494 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 KCNK3O14649 394 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 IL2RBP14784 551 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 DRD4P21917 467 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 MAGOHP61326 146 aaKnown RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 HIBCHQ6NVY1 386 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 TBC1D5Q92609 795 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 MAGOHBQ96A72 148 aaKnown RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 NUCKS1Q9H1E3 243 aaKnown RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 IGHMBP2P38935 993 aaKnown RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 PPP1R7Q15435 360 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 ZKSCAN8Q15776 578 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 ACCSLQ4AC99 568 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 CEP72Q9P209 647 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
XRCC1-201ENST00000262887 TLR2O60603 784 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 TRIM37O94972 964 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 TECP42680 631 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 LRRC63Q05C16 580 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 GRIK3Q13003 919 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 CALML4Q96GE6 196 aa16.41■□□□□ 0.22
XRCC1-201ENST00000262887 CCT8L1PA6NM43 557 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 RPS6KA1Q15418 735 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 RCSD1Q6JBY9 416 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 NEUROG2Q9H2A3 272 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 UTRNP46939 3433 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 CES2O00748 559 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 ARID5AQ03989 594 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
XRCC1-201ENST00000262887 DAGLBQ8NCG7 672 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
XRCC1-201ENST00000262887 ANKRD36CQ5JPF3 1778 aa16.39■□□□□ 0.22
XRCC1-201ENST00000262887 RREB1Q92766 1687 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 DCDC2CA8MYV0 355 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 CCNHP51946 323 aaPredicted RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 POLR2FP61218 127 aaKnown RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 CHRNDQ07001 517 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 ENOX2Q16206 610 aaKnown RBP16.39■□□□□ 0.21
XRCC1-201ENST00000262887 LRRC55Q6ZSA7 311 aa16.39■□□□□ 0.21
XRCC1-201ENST00000262887 ARHGAP27Q6ZUM4 889 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms