RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 MCM5P33992 734 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 ZNF76P36508 570 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 ACAP1Q15027 740 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 PDCD2Q16342 344 aaPredicted RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 IL31Q6EBC2 164 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 MZT2AQ6P582 158 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 OTOP1Q7RTM1 612 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 GAS2L3Q86XJ1 694 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 SPATS2Q86XZ4 545 aaKnown RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 TRIM42Q8IWZ5 723 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 SUN5Q8TC36 379 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
ITCH-201ENST00000262650 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 RBM18Q96H35 190 aaKnown RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 NEK1Q96PY6 1258 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 MAST3O60307 1309 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 EIF3FO00303 357 aaPredicted RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 F2P00734 622 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 SERPINB3P29508 390 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 HSPA4P34932 840 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 NEK3P51956 506 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 PRMT2P55345 433 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 MFSD10Q14728 455 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 NBPF12Q5TAG4 269 aaPredicted RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 PRAMEF18Q5VWM3 479 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 LDHAL6AQ6ZMR3 332 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 HOOK2Q96ED9 719 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 EPS15L1Q9UBC2 864 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 HERC5Q9UII4 1024 aaKnown RBP6.32□□□□□ -1.4
ITCH-201ENST00000262650 PCDHAC2Q9Y5I4 1007 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 SNCAIPQ9Y6H5 919 aa6.32□□□□□ -1.4
ITCH-201ENST00000262650 F6X3S4 739 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 MAP3K7O43318 606 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 PDE8BO95263 885 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 P4HBP07237 508 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 CYP11B2P19099 503 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 VARSP26640 1264 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 CRKP46108 304 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 RAB27AP51159 221 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 KRT83P78385 493 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 MAP3K9P80192 1104 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 APBA1Q02410 837 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 PDE1CQ14123 709 aaPredicted RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 CCDC122Q5T0U0 273 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CCDC91Q7Z6B0 441 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 EFCAB13Q8IY85 973 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 PEX5LQ8IYB4 626 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 USP33Q8TEY7 942 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 HPS3Q969F9 1004 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CLMNQ96JQ2 1002 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CWC15Q9P013 229 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 LRRFIP2Q9Y608 721 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 SLC4A1P02730 911 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 IFIT2P09913 472 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 GTF2A2P52657 109 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 RACK1P63244 317 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 MOGSQ13724 837 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 KIF22Q14807 665 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 TKFCQ3LXA3 575 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 RILPL1Q5EBL4 403 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 MZT2BQ6NZ67 158 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CCDC26Q8TAB7 109 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CCDC68Q9H2F9 335 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CYP4F11Q9HBI6 524 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 SNAP23O00161 211 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 RTCAO00442 366 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 KIF11P52732 1056 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 RWDD2BP57060 319 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 PPIL2Q13356 520 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 POSTNQ15063 836 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 WDR44Q5JSH3 913 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 HHATQ5VTY9 493 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 APOBEC3HQ6NTF7 200 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 CEP68Q76N32 757 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 TMEM57Q8N5G2 664 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 BICD2Q8TD16 824 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 BRI3BPQ8WY22 251 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 THAP11Q96EK4 314 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 ZNF333Q96JL9 665 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 PUS3Q9BZE2 481 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 TRIM8Q9BZR9 551 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 CPSF2Q9P2I0 782 aaKnown RBP6.31□□□□□ -1.4
ITCH-201ENST00000262650 ALPK3Q96L96 1907 aa6.31□□□□□ -1.4
ITCH-201ENST00000262650 ZSCAN9O15535 394 aaPredicted RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 PRPF3O43395 683 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 SMC2O95347 1197 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 GNAT2P19087 354 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 SKIV2L2P42285 1042 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 HTR3AP46098 478 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CLK2P49760 499 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 SOX10P56693 466 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CAP1Q01518 475 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 VAC14Q08AM6 782 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CRHR2Q13324 411 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms