RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Mctp1E9PV86 951 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Olfr67F8VPJ8 320 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Gm3138K7N754 218 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Nck2O55033 380 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Actr2P61161 394 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Q3UK37 420 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 NfrkbQ6PIJ4 1296 aaKnown RBP16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Znf784Q8BI69 297 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Atp2a1Q8R429 994 aa16.47■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Fam205aA2APU8 1308 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Gm44511A0A0N4SW10 223 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Cops5O35864 334 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Mt-CybP00158 381 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Mcm3P25206 812 aaKnown RBP16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Klrb1bP27812 223 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Eif3j1Q3UGC7 261 aaKnown RBP16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Rrp12Q6P5B0 1295 aaKnown RBP16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Raver2Q7TPD6 673 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Usp6nlQ80XC3 819 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 3830417A13RikQ8BQJ2 303 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Azin2Q8BVM4 459 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ddx19bQ8BZY3 494 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Pcdhb12Q91Y07 789 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Tas1r3Q925D8 858 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ppp1r3gQ9CW07 347 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 IydQ9DCX8 285 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Limd1Q9QXD8 668 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Vnn1Q9Z0K8 512 aa16.46■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Sbf1Q6ZPE2 1867 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Gm9857F7CXR1 130 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 MafgO54790 162 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Serpina1aP07758 413 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Serpina1bP22599 413 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Irs1P35569 1233 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Psmc6P62334 389 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Serpina1cQ00896 412 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Serpina1dQ00897 413 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Tff2Q03404 129 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Srrm1Q52KI8 946 aaKnown RBP16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Sun3Q5SS91 320 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Trpc6Q61143 930 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ddx4Q61496 702 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Prmt6Q6NZB1 378 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Nsun6Q7TS68 476 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Tbc1d10cQ8C9V1 444 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Fermt2Q8CIB5 680 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Trib2Q8K4K3 343 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 SrrtQ99MR6 875 aaKnown RBP16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ranbp17Q99NF8 1088 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Josd2Q9CR30 188 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 PolkQ9QUG2 852 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Extl3Q9WVL6 918 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Large1Q9Z1M7 756 aa16.45■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Nfx1B1AY10 1114 aaKnown RBP16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Syce3B5KM66 88 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Rsph10bE9PYQ0 876 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Clec11aO88200 328 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 UgcgO88693 394 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Mov10P23249 1004 aaKnown RBP16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Hoxd10P28359 340 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Mcm6P97311 821 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Mansc4Q3UU94 337 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Tgoln2Q62314 363 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ddr2Q62371 854 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ces1eQ64176 562 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ece2Q80Z60 881 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Cep128Q8BI22 1102 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 C1qtnf12Q8R2Z0 308 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Ddx39aQ8VDW0 427 aaKnown RBP16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Dqx1Q924H9 718 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Kremen1Q99N43 473 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Pkp2Q9CQ73 795 aaKnown RBP16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 4931400O07RikQ9D4M5 137 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Eif4e3Q9DBB5 207 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Msgn1Q9JK54 188 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Cabp5Q9JLK3 173 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Mx2Q9WVP9 655 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 CluhQ5SW19 1315 aa16.44■□□□□ 0.22
Ercc1-201ENSMUST00000003645 MtrA6H5Y3 1253 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Herc3A6H6S0 1050 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Apol7aB2RT54 418 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Psmc5P62196 406 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Cntnap5bQ0V8T8 1292 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Arhgap1Q5FWK3 439 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Etaa1Q5SVT3 877 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Aggf1Q7TN31 711 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Nim1kQ8BHI9 436 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Dennd2aQ8C4S8 1000 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Pde5aQ8CG03 865 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 GneQ91WG8 722 aaKnown RBP16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Spdl1Q923A2 608 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Tmem192Q9CXT7 266 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 GsdmeQ9Z2D3 512 aa16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Smchd1Q6P5D8 2007 aaKnown RBP16.43■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Krt36B1AQ75 473 aa16.42■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Tpm3-rs7D3Z2H9 248 aa16.42■□□□□ 0.22
Ercc1-201ENSMUST00000003645 MafbP54841 323 aa16.42■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Slc7a1Q09143 622 aa16.42■□□□□ 0.22
Ercc1-201ENSMUST00000003645 Vwa3aQ3UVV9 1148 aa16.42■□□□□ 0.22
Ercc1-201ENSMUST00000003645 P4ha1Q60715 534 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms