RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W IPK1Q06667 281 aa3.4□□□□□ -1.87
YDR340WYDR340W NDJ1Q12366 352 aa3.4□□□□□ -1.87
YDR340WYDR340W SFG1Q12507 346 aa3.4□□□□□ -1.87
YDR340WYDR340W SUC2P00724 532 aa3.39□□□□□ -1.87
YDR340WYDR340W CBP2P03874 630 aaPredicted RBP3.39□□□□□ -1.87
YDR340WYDR340W PUT4P15380 627 aa3.39□□□□□ -1.87
YDR340WYDR340W SAG1P20840 650 aa3.39□□□□□ -1.87
YDR340WYDR340W RPI1P23250 407 aaKnown RBP3.39□□□□□ -1.87
YDR340WYDR340W NRP1P32770 719 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
YDR340WYDR340W PTK1P36002 662 aaPredicted RBP3.39□□□□□ -1.87
YDR340WYDR340W SPC97P38863 823 aa3.39□□□□□ -1.87
YDR340WYDR340W VPS45P38932 577 aa3.39□□□□□ -1.87
YDR340WYDR340W PHO90P39535 881 aa3.39□□□□□ -1.87
YDR340WYDR340W YFR018CP43599 363 aa3.39□□□□□ -1.87
YDR340WYDR340W PHO86P46956 311 aa3.39□□□□□ -1.87
YDR340WYDR340W LGE1Q02796 332 aaKnown RBP3.39□□□□□ -1.87
YDR340WYDR340W YDR387CQ04162 555 aa3.39□□□□□ -1.87
YDR340WYDR340W VPS20Q04272 221 aa3.39□□□□□ -1.87
YDR340WYDR340W SMA2Q04658 369 aa3.39□□□□□ -1.87
YDR340WYDR340W RLP24Q07915 199 aaKnown RBP3.39□□□□□ -1.87
YDR340WYDR340W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
YDR340WYDR340W BUG1Q12191 341 aa3.39□□□□□ -1.87
YDR340WYDR340W RRI1Q12468 440 aa3.39□□□□□ -1.87
YDR340WYDR340W YIL002W-AQ3E7Z5 69 aa3.39□□□□□ -1.87
YDR340WYDR340W RAD61Q99359 647 aa3.39□□□□□ -1.87
YDR340WYDR340W VPS63O13549 108 aa3.38□□□□□ -1.87
YDR340WYDR340W CDC21P06785 304 aa3.38□□□□□ -1.87
YDR340WYDR340W GCD2P12754 651 aaPredicted RBP3.38□□□□□ -1.87
YDR340WYDR340W URE2P23202 354 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W RPS2P25443 254 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W PPZ1P26570 692 aa3.38□□□□□ -1.87
YDR340WYDR340W APE2P32454 952 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W YSC83P32792 385 aa3.38□□□□□ -1.87
YDR340WYDR340W EBP2P36049 427 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W HOT13P36078 116 aa3.38□□□□□ -1.87
YDR340WYDR340W YBL028CP38202 106 aa3.38□□□□□ -1.87
YDR340WYDR340W QDR3P38227 689 aa3.38□□□□□ -1.87
YDR340WYDR340W SPP381P38282 291 aaPredicted RBP3.38□□□□□ -1.87
YDR340WYDR340W YHR131CP38835 850 aa3.38□□□□□ -1.87
YDR340WYDR340W SSO2P39926 295 aa3.38□□□□□ -1.87
YDR340WYDR340W GAT2P40209 560 aa3.38□□□□□ -1.87
YDR340WYDR340W AIP1P46680 615 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W VPS25P47142 202 aa3.38□□□□□ -1.87
YDR340WYDR340W ATP23P53722 227 aa3.38□□□□□ -1.87
YDR340WYDR340W YNL234WP53857 426 aa3.38□□□□□ -1.87
YDR340WYDR340W RHO4Q00246 291 aa3.38□□□□□ -1.87
YDR340WYDR340W NUP100Q02629 959 aa3.38□□□□□ -1.87
YDR340WYDR340W CTL1Q03220 320 aaKnown RBP3.38□□□□□ -1.87
YDR340WYDR340W MSC3Q05812 728 aa3.38□□□□□ -1.87
YDR340WYDR340W DIC1Q06143 298 aa3.38□□□□□ -1.87
YDR340WYDR340W NSE1Q07913 336 aa3.38□□□□□ -1.87
YDR340WYDR340W GSH2Q08220 491 aa3.38□□□□□ -1.87
YDR340WYDR340W GAL4P04386 881 aa3.37□□□□□ -1.87
YDR340WYDR340W SAM1P10659 382 aaKnown RBP3.37□□□□□ -1.87
YDR340WYDR340W COQ3P27680 312 aa3.37□□□□□ -1.87
YDR340WYDR340W CYS4P32582 507 aaKnown RBP3.37□□□□□ -1.87
YDR340WYDR340W UTR4P32626 227 aa3.37□□□□□ -1.87
YDR340WYDR340W RAD24P32641 659 aa3.37□□□□□ -1.87
YDR340WYDR340W FLO10P36170 1169 aa3.37□□□□□ -1.87
YDR340WYDR340W INM1P38710 295 aa3.37□□□□□ -1.87
YDR340WYDR340W LIN1P38852 340 aaPredicted RBP3.37□□□□□ -1.87
YDR340WYDR340W MNN9P39107 395 aaKnown RBP3.37□□□□□ -1.87
YDR340WYDR340W PAC11P40960 533 aa3.37□□□□□ -1.87
YDR340WYDR340W TRS85P46944 698 aa3.37□□□□□ -1.87
YDR340WYDR340W BRO1P48582 844 aa3.37□□□□□ -1.87
YDR340WYDR340W GPI1P53306 609 aa3.37□□□□□ -1.87
YDR340WYDR340W CWC22P53333 577 aaKnown RBP3.37□□□□□ -1.87
YDR340WYDR340W ALF1P53904 254 aa3.37□□□□□ -1.87
YDR340WYDR340W EGD1Q02642 157 aaKnown RBP3.37□□□□□ -1.87
YDR340WYDR340W GIP3Q03016 1276 aa3.37□□□□□ -1.87
YDR340WYDR340W IVY1Q04934 453 aa3.37□□□□□ -1.87
YDR340WYDR340W GLO2Q05584 274 aa3.37□□□□□ -1.87
YDR340WYDR340W YLR413WQ06689 675 aa3.37□□□□□ -1.87
YDR340WYDR340W IRC10Q08118 586 aa3.37□□□□□ -1.87
YDR340WYDR340W RUP1Q12242 671 aa3.37□□□□□ -1.87
YDR340WYDR340W YOR012WQ12351 137 aa3.37□□□□□ -1.87
YDR340WYDR340W CDC37P06101 506 aaKnown RBP3.36□□□□□ -1.87
YDR340WYDR340W CHS1P08004 1131 aa3.36□□□□□ -1.87
YDR340WYDR340W PSO2P30620 661 aa3.36□□□□□ -1.87
YDR340WYDR340W SMY1P32364 656 aaKnown RBP3.36□□□□□ -1.87
YDR340WYDR340W YER079WP40052 210 aaKnown RBP3.36□□□□□ -1.87
YDR340WYDR340W FAU1P40099 211 aa3.36□□□□□ -1.87
YDR340WYDR340W PCP1P53259 346 aa3.36□□□□□ -1.87
YDR340WYDR340W CUR1Q06469 252 aa3.36□□□□□ -1.87
YDR340WYDR340W NRT1Q08485 598 aa3.36□□□□□ -1.87
YDR340WYDR340W PEX27Q08580 376 aa3.36□□□□□ -1.87
YDR340WYDR340W YLR112WQ12130 139 aa3.36□□□□□ -1.87
YDR340WYDR340W RKM5Q12367 367 aa3.36□□□□□ -1.87
YDR340WYDR340W THR4P16120 514 aaKnown RBP3.35□□□□□ -1.87
YDR340WYDR340W RAD57P25301 460 aa3.35□□□□□ -1.87
YDR340WYDR340W ADY2P25613 283 aa3.35□□□□□ -1.87
YDR340WYDR340W RGT1P32862 1170 aa3.35□□□□□ -1.87
YDR340WYDR340W PHD1P36093 366 aa3.35□□□□□ -1.87
YDR340WYDR340W TIF5P38431 405 aaKnown RBP3.35□□□□□ -1.87
YDR340WYDR340W LEU5P38702 357 aa3.35□□□□□ -1.87
YDR340WYDR340W STP2P38704 541 aa3.35□□□□□ -1.87
YDR340WYDR340W RTT107P38850 1070 aa3.35□□□□□ -1.87
YDR340WYDR340W YHR177WP38867 453 aa3.35□□□□□ -1.87
YDR340WYDR340W END3P39013 349 aa3.35□□□□□ -1.87
YDR340WYDR340W YPS6P40583 537 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms