RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	NPC1L1	Q9UHC9	1359 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746		A0A0G2JLL6	359 aa	Predicted RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746		H7C1D1	291 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	CBX7	O95931	251 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	CYP19A1	P11511	503 aa	Predicted RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	CANX	P27824	592 aa	Known RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	ALDH1B1	P30837	517 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	SREBF2	Q12772	1141 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	LRRC14	Q15048	493 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	NKG7	Q16617	165 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	LLGL2	Q6P1M3	1020 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	MAFA	Q8NHW3	353 aa	Predicted RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	ELMO3	Q96BJ8	720 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	SETDB2	Q96T68	719 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	P2RX7	Q99572	595 aa	Known RBP	7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	RBCK1	Q9BYM8	510 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	ZCCHC4	Q9H5U6	513 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	SP110	Q9HB58	689 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	CACNA1A	O00555	2505 aa		7.01	□□□□□ -1.29
CASC19-256	ENST00000641746	ANKRD31	Q8N7Z5	1873 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	HTT	P42858	3142 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	BMP8B	P34820	402 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	DLG4	P78352	724 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	TNK2	Q07912	1038 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7	□□□□□ -1.29
CASC19-256	ENST00000641746	TAF7L	Q5H9L4	462 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	LETMD1	Q6P1Q0	360 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	TPTE2	Q6XPS3	522 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	MOB2	Q70IA6	237 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	TMPRSS7	Q7RTY8	843 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	KCNC2	Q96PR1	638 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	CEP44	Q9C0F1	390 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	WNT10A	Q9GZT5	417 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	SLC12A5	Q9H2X9	1139 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	UST	Q9Y2C2	406 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	CACNA1S	Q13698	1873 aa		7	□□□□□ -1.29
CASC19-256	ENST00000641746	EDC4	Q6P2E9	1401 aa	Known RBP	7	□□□□□ -1.29
CASC19-256	ENST00000641746	UBE2Q2L	H0YL09	131 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	PPIP5K2	O43314	1243 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	RAD17	O75943	681 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	TRHR	P34981	398 aa	Predicted RBP	6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	LRFN4	Q6PJG9	635 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	DBX2	Q6ZNG2	339 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	SH3TC2	Q8TF17	1288 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	SHISA4	Q96DD7	197 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	CDCA5	Q96FF9	252 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	RNF32	Q9H0A6	362 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	ZNRF3	Q9ULT6	936 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	CYP8B1	Q9UNU6	501 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746	PTCH2	Q9Y6C5	1203 aa		6.99	□□□□□ -1.29
CASC19-256	ENST00000641746		A0A1W2PP64	1363 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	CENPF	P49454	3210 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	MYOCOS	A0A1B0GUC4	107 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	HSP90AB1	P08238	724 aa	Known RBP	6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	KIR3DL1	P43629	444 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	PTPN11	Q06124	597 aa	Predicted RBP	6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	B4GALNT3	Q6L9W6	998 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	COX4I2	Q96KJ9	171 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	GDF15	Q99988	308 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	TERF2IP	Q9NYB0	399 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	CDHR2	Q9BYE9	1310 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	MRC1	P22897	1456 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	LAMA3	Q16787	3333 aa		6.98	□□□□□ -1.29
CASC19-256	ENST00000641746	TONSL	Q96HA7	1378 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746		A0A087WZG4	1122 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	PRAMEF27	A3QJZ7	478 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	WASH4P	A8MWX3	477 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	TCERG1	O14776	1098 aa	Known RBP	6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	PEX10	O60683	326 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	FKBP1B	P68106	108 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	CAP1	Q01518	475 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	TNIP1	Q15025	636 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	NBPF5P	Q86XG9	351 aa	Predicted RBP	6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	HID1	Q8IV36	788 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	TDH	Q8IZJ6	230 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	PLPPR2	Q96GM1	343 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	WASHC2A	Q641Q2	1341 aa		6.97	□□□□□ -1.29
CASC19-256	ENST00000641746	ZNF609	O15014	1411 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	SNED1	Q8TER0	1413 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	ST20-MTHFS	A0A0A6YYL1	179 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	KLRG2	A4D1S0	409 aa	Predicted RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	CST3	P01034	146 aa	Predicted RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	CYP7A1	P22680	504 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	MTHFS	P49914	203 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	MRE11	P49959	708 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	EIF5	P55010	431 aa	Known RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	SP3	Q02447	781 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	FAM109B	Q6ICB4	259 aa	Predicted RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	HDX	Q7Z353	690 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	UBE2Q1	Q7Z7E8	422 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	IRF2BP1	Q8IU81	584 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	PIWIL2	Q8TC59	973 aa	Known RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	CDX2	Q99626	313 aa	Predicted RBP	6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	C1QTNF1	Q9BXJ1	281 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	PPM1H	Q9ULR3	514 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	CEP290	O15078	2479 aa		6.96	□□□□□ -1.3
CASC19-256	ENST00000641746	PRAMEF22	A3QJZ6	481 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms