RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 MKL2Q9ULH7 1088 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 ATP8B3O60423 1300 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 CRKLP46109 303 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 SCARA5Q6ZMJ2 495 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 NT5C1BQ96P26 610 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 HIP1RO75146 1068 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 DARS2Q6PI48 645 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 CLIC4Q9Y696 253 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 NUP160Q12769 1436 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 ADORA1P30542 326 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 EHHADHQ08426 723 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 ADCY1Q08828 1119 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 TSC1Q92574 1164 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 MMTAG2Q9BU76 263 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 MYO5CQ9NQX4 1742 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 MICAL3Q7RTP6 2002 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 HOXB7P09629 217 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 TRMT10CQ7L0Y3 403 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 CNOT6LQ96LI5 555 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 Q9H521 79 aa17.3■□□□□ 0.36
CACNA1A-221ENST00000636012 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 ZNF274Q96GC6 653 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 AMNQ9BXJ7 453 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 TEKT2Q9UIF3 430 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 SLC13A4Q9UKG4 626 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 HSPD1P10809 573 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 SNAP25P60880 206 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 MYO1EQ12965 1108 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 CD58P19256 250 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 NDUFA8P51970 172 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 HEXIM2Q96MH2 286 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 XDHP47989 1333 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 KCNQ3O43525 872 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 GALNT17Q6IS24 598 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 MED7O43513 233 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 CLTAP09496 248 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 PPP2R5EQ16537 467 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 SIK1P57059 783 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 DEPDC1BQ8WUY9 529 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 HSPH1Q92598 858 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 NACC1Q96RE7 527 aa17.29■□□□□ 0.36
CACNA1A-221ENST00000636012 SERPINI2O75830 405 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 DDAH1O94760 285 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 CDO1Q16878 200 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 PIP4K2CQ8TBX8 421 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 RPGRIP1Q96KN7 1286 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 TRPA1O75762 1119 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 USP14P54578 494 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 GNGT1P63211 74 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 TSC22D1Q15714 1073 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 PTH1RQ03431 593 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 BTN2A2Q8WVV5 523 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 H3BRJ5 948 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 NR2F2P24468 414 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 STX1BP61266 288 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 ASPRV1Q53RT3 343 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 RNF219Q5W0B1 726 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 TRIM59Q8IWR1 403 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 CCDC138Q96M89 665 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 RPSAP08865 295 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 EFCAB13Q8IY85 973 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 FAM186BQ8IYM0 893 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 TTC25Q96NG3 672 aa17.28■□□□□ 0.36
CACNA1A-221ENST00000636012 BPIFB4P59827 614 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 SYNDIG1Q9H7V2 258 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 GOLGA8QA0A0J9YX86 632 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 GOLGA8OA6NCC3 632 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 GOLGA8NF8WBI6 632 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 DDIT3P35638 169 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 GUCY2DQ02846 1103 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms