RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 NEK11Q8NG66 645 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 KIAA1683Q9H0B3 1180 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 MED4Q9NPJ6 270 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 TMEM260Q9NX78 707 aa19.65■□□□□ 0.74
PCF11-207ENST00000624931 STAT2P52630 851 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 RAD51AP2Q09MP3 1159 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 VGLL4Q14135 290 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 PTPN21Q16825 1174 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 HSP90B2PQ58FF3 399 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 WDR93Q6P2C0 686 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.64■□□□□ 0.73
PCF11-207ENST00000624931 GRAMD1CQ8IYS0 662 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 FAM71BQ8TC56 605 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 ZC3H15Q8WU90 426 aaKnown RBP19.64■□□□□ 0.73
PCF11-207ENST00000624931 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 VIPAS39Q9H9C1 493 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 EMILIN3Q9NT22 766 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 CLEC11AQ9Y240 323 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 SNCAIPQ9Y6H5 919 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 ZHX2Q9Y6X8 837 aa19.64■□□□□ 0.73
PCF11-207ENST00000624931 CASP14P31944 242 aa19.63■□□□□ 0.73
PCF11-207ENST00000624931 NOL9Q5SY16 702 aaKnown RBP19.63■□□□□ 0.73
PCF11-207ENST00000624931 ZNF662Q6ZS27 426 aa19.63■□□□□ 0.73
PCF11-207ENST00000624931 SYMPKQ92797 1274 aaKnown RBP19.63■□□□□ 0.73
PCF11-207ENST00000624931 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 N4BP3O15049 544 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 GTPBP6O43824 516 aaPredicted RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 GYPCP04921 128 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 CD44P16070 742 aaKnown RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 ADCY7P51828 1080 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 UBE2SQ16763 222 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 USH1GQ495M9 461 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 MAP1SQ66K74 1059 aaPredicted RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 WDR18Q9BV38 432 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 C6orf50Q9HD87 102 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 ZCCHC17Q9NP64 241 aaKnown RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 ABHD10Q9NUJ1 306 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 BIN2Q9UBW5 565 aaPredicted RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 TRAF5O00463 557 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 VCAM1P19320 739 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 AFMP43652 599 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 MAP9Q49MG5 647 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 KLHL10Q6JEL2 608 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 CCDC174Q6PII3 467 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 SLC35F6Q8N357 371 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 ZNF280CQ8ND82 737 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 CLMNQ96JQ2 1002 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 RRAGCQ9HB90 399 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 PUF60Q9UHX1 559 aaKnown RBP19.62■□□□□ 0.73
PCF11-207ENST00000624931 PCDHA1Q9Y5I3 950 aa19.62■□□□□ 0.73
PCF11-207ENST00000624931 SMCHD1A6NHR9 2005 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 ESYT2A0FGR8 921 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 LMAN1P49257 510 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 COPB1P53618 953 aaKnown RBP19.61■□□□□ 0.73
PCF11-207ENST00000624931 HMGCS2P54868 508 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 ATP2C1P98194 919 aaPredicted RBP19.61■□□□□ 0.73
PCF11-207ENST00000624931 ZNF174Q15697 407 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 USP49Q70CQ1 688 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 EHBP1Q8NDI1 1231 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 CPLX3Q8WVH0 158 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 HAUS4Q9H6D7 363 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 MYO6Q9UM54 1294 aa19.61■□□□□ 0.73
PCF11-207ENST00000624931 H3BQF6 201 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 WDR46O15213 610 aaKnown RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 BACE1P56817 501 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 PAK1Q13153 545 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 KRT31Q15323 416 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 INF2Q27J81 1249 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 TTC38Q5R3I4 469 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 ZNF658Q5TYW1 1059 aaPredicted RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 GALNT17Q6IS24 598 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 PPP1R18Q6NYC8 613 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 PNMA8AQ86V59 439 aaPredicted RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 FBXO11Q86XK2 927 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 ZNF526Q8TF50 670 aaPredicted RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 EPSTI1Q96J88 318 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 IRX2Q9BZI1 471 aaPredicted RBP19.6■□□□□ 0.73
PCF11-207ENST00000624931 TANGO6Q9C0B7 1094 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 AS3MTQ9HBK9 375 aa19.6■□□□□ 0.73
PCF11-207ENST00000624931 CCDC194A0A1B0GVG4 234 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 A0A1W2PQC6 194 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 STX17P56962 302 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 TSR1Q2NL82 804 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 ARL6IP4Q66PJ3 421 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 REXO1Q8N1G1 1221 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 RPAP3Q9H6T3 665 aaPredicted RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 ELP3Q9H9T3 547 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 PDE11AQ9HCR9 933 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 ABCB6Q9NP58 842 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 FEM1BQ9UK73 627 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 A0A087X0B3 334 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 PPP1R12BO60237 982 aaPredicted RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 MYL1P05976 194 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 GNA11P29992 359 aa19.59■□□□□ 0.73
PCF11-207ENST00000624931 FXR1P51114 621 aaKnown RBP eCLIP19.59■□□□□ 0.73
PCF11-207ENST00000624931 CKAP4Q07065 602 aaKnown RBP19.59■□□□□ 0.73
PCF11-207ENST00000624931 MCM6Q14566 821 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms