RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RBL2Q08999 1139 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 KIAA0753Q2KHM9 967 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 C8orf34Q49A92 452 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 MCF2L2Q86YR7 1114 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 TAAR1Q96RJ0 339 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 IWS1Q96ST2 819 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 ZKSCAN3Q9BRR0 538 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 RNF41Q9H4P4 317 aaPredicted RBP9.13□□□□□ -0.95
CLK1-215ENST00000621181 C11orf16Q9NQ32 467 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 INSL6Q9Y581 213 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 MRVI1Q9Y6F6 885 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 KIAA1217Q5T5P2 1943 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 ABCB11O95342 1321 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 C5orf42Q9H799 3197 aa9.13□□□□□ -0.95
CLK1-215ENST00000621181 PI4K2BG5E9Z4 385 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 F2P00734 622 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 PSEN2P49810 448 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 PTK7Q13308 1070 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 MFSD10Q14728 455 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 ZNF618Q5T7W0 954 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 ANKRD45Q5TZF3 282 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 IQCA1Q86XH1 822 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 DGKHQ86XP1 1220 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 MYOCDQ8IZQ8 938 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 GJD3Q8N144 294 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 PNMA1Q8ND90 353 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 PPTC7Q8NI37 304 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 SYTL5Q8TDW5 730 aaPredicted RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 TBC1D5Q92609 795 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 MAF1Q9H063 256 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 CD320Q9NPF0 282 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 SALL3Q9BXA9 1300 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 SIP14410 1827 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 MYH6P13533 1939 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 EIF3JO75822 258 aaKnown RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 DEKP35659 375 aaKnown RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 PDE1AP54750 535 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 TCTN1Q2MV58 587 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 LEXMQ3ZCV2 418 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 TBC1D10CQ8IV04 446 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 ADGRF4Q8IZF3 695 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 KAT14Q9H8E8 782 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 MRPL11Q9Y3B7 192 aaKnown RBP9.12□□□□□ -0.95
CLK1-215ENST00000621181 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 NEDD4P46934 1319 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 EMSYQ7Z589 1322 aa9.12□□□□□ -0.95
CLK1-215ENST00000621181 MYH7BA7E2Y1 1941 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.11□□□□□ -0.95
CLK1-215ENST00000621181 ZNF213O14771 459 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 LGR5O75473 907 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 CFBP00751 764 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 AMHP03971 560 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 NR3C2P08235 984 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 THPOP40225 353 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
CLK1-215ENST00000621181 ZNF200P98182 395 aaPredicted RBP9.11□□□□□ -0.95
CLK1-215ENST00000621181 PTPROQ16827 1216 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 QRICH1Q2TAL8 776 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 ASPRV1Q53RT3 343 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
CLK1-215ENST00000621181 EP400NLQ6ZTU2 488 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 FBXO11Q86XK2 927 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 FAM178BQ8IXR5 827 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 WNT8BQ93098 351 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 C17orf80Q9BSJ5 609 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 PCDHB8Q9UN66 801 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 MICAL3Q7RTP6 2002 aa9.11□□□□□ -0.95
CLK1-215ENST00000621181 PRR33A8MZF0 331 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 HAS3O00219 553 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 SORBS3O60504 671 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 KDM4AO75164 1064 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 IGHDP01880 384 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 ALADP13716 330 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 IL9P15248 144 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 NMIQ13287 307 aaPredicted RBP9.1□□□□□ -0.95
CLK1-215ENST00000621181 MBTPS1Q14703 1052 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 CCDC178Q5BJE1 867 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLK1-215ENST00000621181 DBF4BQ8NFT6 615 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.1□□□□□ -0.95
CLK1-215ENST00000621181 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 MRPL38Q96DV4 380 aaKnown RBP9.1□□□□□ -0.95
CLK1-215ENST00000621181 SPATA33Q96N06 139 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 YME1L1Q96TA2 773 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 VAT1LQ9HCJ6 419 aa9.1□□□□□ -0.95
CLK1-215ENST00000621181 PXMP2Q9NR77 195 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms