RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 HAS3O00219 553 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 DLL1O00548 723 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 GGPS1O95749 300 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 ICAM3P32942 547 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 PSEN2P49810 448 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 KRT32Q14532 448 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 MFSD10Q14728 455 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 GRIN2CQ14957 1233 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 KIAA0753Q2KHM9 967 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 GDF6Q6KF10 455 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 PHOSPHO2Q8TCD6 241 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 MYLIPQ8WY64 445 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 INPP4AQ96PE3 977 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 NEK1Q96PY6 1258 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
TARDBP-218ENST00000617172 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
TARDBP-218ENST00000617172 FRMPD4Q14CM0 1322 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 SPATA31C2B4DYI2 1134 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 MEIS2O14770 477 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 FIBPO43427 364 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 CDC45O75419 566 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 SELPP16109 830 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 ATP2A2P16615 1042 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 UBA1P22314 1058 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 PBX2P40425 430 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 MRPS9P82933 396 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 SP2Q02086 613 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 RBL2Q08999 1139 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 PTK7Q13308 1070 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 METTL7BQ6UX53 244 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 DHX32Q7L7V1 743 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 DEFB128Q7Z7B8 93 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 IL31RAQ8NI17 732 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 RBM28Q9NW13 759 aaKnown RBP11.14□□□□□ -0.63
TARDBP-218ENST00000617172 HDAC6Q9UBN7 1215 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 PCDHA11Q9Y5I1 949 aa11.14□□□□□ -0.63
TARDBP-218ENST00000617172 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 H3BRB1 525 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 MAFGO15525 162 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 BAIAP3O94812 1187 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 EXOSC10Q01780 885 aaKnown RBP11.13□□□□□ -0.63
TARDBP-218ENST00000617172 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 VWCEQ96DN2 955 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 TUT1Q9H6E5 874 aaKnown RBP11.13□□□□□ -0.63
TARDBP-218ENST00000617172 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
TARDBP-218ENST00000617172 SPDYE3A6NKU9 549 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 GNAT1P11488 350 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 CKBP12277 381 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 RXRAP19793 462 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 RCAN1P53805 252 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 APOA5Q6Q788 366 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 LRRC8DQ7L1W4 858 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 GPRASP2Q96D09 838 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 CTAGE1Q96RT6 745 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 EHMT1Q9H9B1 1298 aa11.12□□□□□ -0.63
TARDBP-218ENST00000617172 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 CCDC196A0A1B0GTZ2 297 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 hCG_1984214I3L0E3 225 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 ZBTB43O43298 467 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 EFCAB14O75071 495 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 FOSP01100 380 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 KCNJ6P48051 423 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 FGD1P98174 961 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 CYFIP1Q7L576 1253 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 HEATR3Q7Z4Q2 680 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 SERINC5Q86VE9 423 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 CMTR1Q8N1G2 835 aaKnown RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 ZNF713Q8N859 430 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
TARDBP-218ENST00000617172 ZNF215Q9UL58 517 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 YBX2Q9Y2T7 364 aaKnown RBP11.11□□□□□ -0.63
TARDBP-218ENST00000617172 EMSYQ7Z589 1322 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms