RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 FAN1Q9Y2M0 1017 aa7.64□□□□□ -1.19
SCAMP1-205ENST00000614488 KRIT1O00522 736 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 MAFKO60675 156 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 TADA3O75528 432 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 ATF2P15336 505 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 CACNB2Q08289 660 aaPredicted RBP7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 CCDC144BQ3MJ40 725 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 STEAP3Q658P3 488 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 ETV3LQ6ZN32 361 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 SIAH1Q8IUQ4 282 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 NLGN1Q8N2Q7 840 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 LILRB2Q8N423 598 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 PHOSPHO1Q8TCT1 267 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 DACT3Q96B18 629 aaPredicted RBP7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 ALG1Q9BT22 464 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 PTCH2Q9Y6C5 1203 aa7.63□□□□□ -1.19
SCAMP1-205ENST00000614488 FAM47E-STBD1D6RA91 191 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 SOD2P04179 222 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 LIMS1P48059 325 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 FZD5Q13467 585 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 TCERG1LQ5VWI1 586 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 IRF2BPLQ9H1B7 796 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 PCDH18Q9HCL0 1135 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 SLC6A20Q9NP91 592 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 TRAF6Q9Y4K3 522 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 PCDHB4Q9Y5E5 795 aa7.62□□□□□ -1.19
SCAMP1-205ENST00000614488 EFCAB14O75071 495 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 MC3RP41968 323 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 FOXO4P98177 505 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 MTDHQ86UE4 582 aaKnown RBP7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 PANK1Q8TE04 598 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 JAM3Q9BX67 310 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 SMOC1Q9H4F8 434 aa7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 NGRNQ9NPE2 291 aaKnown RBP7.61□□□□□ -1.19
SCAMP1-205ENST00000614488 TCRBV5S2A0A599 114 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 WNT9AO14904 365 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 ZSCAN22P10073 491 aaPredicted RBP7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 AFF3P51826 1226 aaKnown RBP7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 HTRA3P83110 453 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 SPIRE1Q08AE8 756 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 PAK1Q13153 545 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 TRIM61Q5EBN2 209 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 HABP4Q5JVS0 413 aaKnown RBP7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 OTOP3Q7RTS5 596 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 ZC3H18Q86VM9 953 aaKnown RBP7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 SMARCC2Q8TAQ2 1214 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 MRPL4Q9BYD3 311 aaKnown RBP7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 MYOTQ9UBF9 498 aa7.6□□□□□ -1.19
SCAMP1-205ENST00000614488 ARVCFO00192 962 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 C8BP07358 591 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 CYP2C8P10632 490 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 GNAT1P11488 350 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 LCNL1Q6ZST4 164 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 GSTCDQ8NEC7 633 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 PIP4K2CQ8TBX8 421 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 PWWP2AQ96N64 755 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 IPPKQ9H8X2 491 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
SCAMP1-205ENST00000614488 PLA2G1BP04054 148 aaKnown RBP7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 GUCY1A3Q02108 690 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 TRIM48Q8IWZ4 208 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 TTLL11Q8NHH1 800 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 UHMK1Q8TAS1 419 aaKnown RBP7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 FNIP1Q8TF40 1166 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 YIPF4Q9BSR8 244 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 PIF1Q9H611 641 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 SLC52A2Q9HAB3 445 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 DTLQ9NZJ0 730 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 ASH2LQ9UBL3 628 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 SFMBT1Q9UHJ3 866 aa7.58□□□□□ -1.2
SCAMP1-205ENST00000614488 KCNQ2O43526 872 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 SPOCD1Q6ZMY3 1216 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 ARRDC4Q8NCT1 418 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 DDX11Q96FC9 970 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 KCNJ15Q99712 375 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 PDGFDQ9GZP0 370 aaPredicted RBP7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 NCOA5Q9HCD5 579 aaKnown RBP7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 NDOR1Q9UHB4 597 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
SCAMP1-205ENST00000614488 APPP05067 770 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 SQSTM1Q13501 440 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 VWA3BQ502W6 1294 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 LINC01356Q8N9X3 169 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 PCDH19Q8TAB3 1148 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 SH3TC2Q8TF17 1288 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 TOE1Q96GM8 510 aaKnown RBP7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 HSPBP1Q9NZL4 362 aa7.56□□□□□ -1.2
SCAMP1-205ENST00000614488 ARID1BQ8NFD5 2236 aaPredicted RBP7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 PLD2O14939 933 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 CRTAMO95727 393 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 COL6A2P12110 1019 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 NKX3-2P78367 333 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 CR1LQ2VPA4 569 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 CD300LDQ6UXZ3 194 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 SAPCD2Q86UD0 394 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms