RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 RBL2Q08999 1139 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 MESDQ14696 234 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 ARL6IP4Q66PJ3 421 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 GJA10Q969M2 543 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 SEPT10Q9P0V9 454 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 SCOCQ9UIL1 159 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 ITKQ08881 620 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 LRRC24Q50LG9 513 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 SPOUT1Q5T280 376 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 CMTR1Q8N1G2 835 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 LINC00301Q8NCQ3 95 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 SPDL1Q96EA4 605 aa18.87■□□□□ 0.61
HMGXB3-206ENST00000613459 CCNA1P78396 465 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 TERF2Q15554 542 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 SGK1O00141 431 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 MSH2P43246 934 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 LRRC63Q05C16 580 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 SGO2Q562F6 1265 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ATP8B3O60423 1300 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 KRT10P13645 584 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ADD2P35612 726 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 SLC7A3Q8WY07 619 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 TTC1Q99614 292 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 MAN1B1Q9UKM7 699 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ANGPTL2Q9UKU9 493 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 CPP00450 1065 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ESRRGP62508 458 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 CUL1Q13616 776 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 VSTM4Q8IW00 320 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 DACT3Q96B18 629 aaPredicted RBP18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ZNF577Q9BSK1 485 aa18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 SRPRBQ9Y5M8 271 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-206ENST00000613459 DIXDC1Q155Q3 683 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 TTLL7Q6ZT98 887 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 CHAMP1Q96JM3 812 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 SPATA31E1Q6ZUB1 1445 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 TYW5A2RUC4 315 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 DTNBO60941 627 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 KIF22Q14807 665 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 ZNF408Q9H9D4 720 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 SH3GLB2Q9NR46 395 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 MAP3K7O43318 606 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 PHEXP78562 749 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 CAPN12Q6ZSI9 719 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 EIF2AQ9BY44 585 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 DHX36Q9H2U1 1008 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 DBNLQ9UJU6 430 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 FRMD3A2A2Y4 597 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 F8W8V4 182 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 RPS6KC1Q96S38 1066 aa18.85■□□□□ 0.61
HMGXB3-206ENST00000613459 IPO5O00410 1097 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 SH2B2O14492 632 aaPredicted RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 NLGN1Q8N2Q7 840 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 UHMK1Q8TAS1 419 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 ESYT2A0FGR8 921 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 GOLGA8HP0CJ92 632 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 LIFRP42702 1097 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 GLE1Q53GS7 698 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 EPB41L5Q9HCM4 733 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 CCDC124Q96CT7 223 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 THRAP3Q9Y2W1 955 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 METTL23Q86XA0 190 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 CXorf38Q8TB03 319 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 XAB2Q9HCS7 855 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 KMT5AQ9NQR1 393 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 RPSAP08865 295 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 PHKA1P46020 1223 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 KAZNQ674X7 775 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 ADAT2Q7Z6V5 191 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 PAGR1Q9BTK6 254 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 DISC1Q9NRI5 854 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 FGFR1OP2Q9NVK5 253 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 ORC6Q9Y5N6 252 aa18.84■□□□□ 0.61
HMGXB3-206ENST00000613459 CYP21A2P08686 494 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 SKIP12755 728 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 ARL4AP40617 200 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 HNRNPH2P55795 449 aaKnown RBP18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 UIMC1Q96RL1 719 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 SUGCTQ9HAC7 445 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 SLC12A6Q9UHW9 1150 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 SPDYE16A6NNV3 312 aaPredicted RBP18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 POC1B-GALNT4F8VUJ3 575 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 TTBK2Q6IQ55 1244 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 ANKFY1Q9P2R3 1169 aa18.83■□□□□ 0.61
HMGXB3-206ENST00000613459 CCDC188H7C350 402 aa18.83■□□□□ 0.6
HMGXB3-206ENST00000613459 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.6
HMGXB3-206ENST00000613459 KCNQ3O43525 872 aa18.83■□□□□ 0.6
HMGXB3-206ENST00000613459 KCTD2Q14681 263 aa18.83■□□□□ 0.6
HMGXB3-206ENST00000613459 KLHL29Q96CT2 875 aa18.83■□□□□ 0.6
HMGXB3-206ENST00000613459 BAG6P46379 1132 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms