RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	RAPGEFL1	Q9UHV5	662 aa		24.49	■■□□□ 1.51
NECAB3-222	ENST00000607805	PTK7	Q13308	1070 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	HIC1	Q14526	733 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	MBTPS1	Q14703	1052 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	MFSD10	Q14728	455 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	KIAA0753	Q2KHM9	967 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	SLC35G1	Q2M3R5	365 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	MYSM1	Q5VVJ2	828 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	C7orf31	Q8N865	590 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	ALG1	Q9BT22	464 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	KATNAL1	Q9BW62	490 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	CNNM2	Q9H8M5	875 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	MAD2L2	Q9UI95	211 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	MRVI1	Q9Y6F6	885 aa		24.48	■■□□□ 1.51
NECAB3-222	ENST00000607805	PALM3	A6NDB9	673 aa	Predicted RBP	24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	RBAK-RBAKDN	I3L0D1	243 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	DHX16	O60231	1041 aa	Known RBP	24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	GJB5	O95377	273 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	ZNF286B	P0CG31	522 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	MKRN4P	Q13434	485 aa	Predicted RBP	24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	SKIV2L	Q15477	1246 aa	Known RBP	24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	VSIG10L	Q86VR7	867 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	SAMD3	Q8N6K7	520 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	LMCD1	Q9NZU5	365 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	CTNNA3	Q9UI47	895 aa		24.47	■■□□□ 1.51
NECAB3-222	ENST00000607805	ABHD14A-ACY1	A0A1B0GW23	586 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	KLRF2	D3W0D1	207 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	ZBTB5	O15062	677 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	PPFIA4	O75335	1185 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	HSDL1	Q3SXM5	330 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	IFIT1B	Q5T764	474 aa	Known RBP	24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	ZNF618	Q5T7W0	954 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	CYB5R4	Q7L1T6	521 aa		24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	DHX37	Q8IY37	1157 aa	Known RBP	24.46	■■□□□ 1.51
NECAB3-222	ENST00000607805	ATG2A	Q2TAZ0	1938 aa		24.45	■■□□□ 1.51
NECAB3-222	ENST00000607805	ZNF200	P98182	395 aa	Predicted RBP	24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	SP2	Q02086	613 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	PGM5	Q15124	567 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	CELF3	Q5SZQ8	465 aa	Known RBP	24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	KCNV1	Q6PIU1	500 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	IL31RA	Q8NI17	732 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	RAD9A	Q99638	391 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	UBAC1	Q9BSL1	405 aa		24.45	■■□□□ 1.5
NECAB3-222	ENST00000607805	HOXC8	P31273	242 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	ERVK-21	P61565	698 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	HLA-C	Q95604	372 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	C16orf70	Q9BSU1	422 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	RIOX1	Q9H6W3	641 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	PCDHA1	Q9Y5I3	950 aa		24.44	■■□□□ 1.5
NECAB3-222	ENST00000607805	RALGAPA2	Q2PPJ7	1873 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	EFCAB14	O75071	495 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	TGFB3	P10600	412 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	SERINC5	Q86VE9	423 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	GDPD5	Q8WTR4	605 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	SUGCT	Q9HAC7	445 aa		24.43	■■□□□ 1.5
NECAB3-222	ENST00000607805	LINC01553	A4QN01	128 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	GGPS1	O95749	300 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	MYCL	P12524	364 aa	Predicted RBP	24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	UBA1	P22314	1058 aa	Known RBP	24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	HOXA13	P31271	388 aa	Predicted RBP	24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	IKBKE	Q14164	716 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	24.42	■■□□□ 1.5	4e-6	■□□□□ 10.4
NECAB3-222	ENST00000607805	SPATA33	Q96N06	139 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	ZBED2	Q9BTP6	218 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	C5orf42	Q9H799	3197 aa		24.42	■■□□□ 1.5
NECAB3-222	ENST00000607805	GRM4	Q14833	912 aa		24.41	■■□□□ 1.5
NECAB3-222	ENST00000607805	TGS1	Q96RS0	853 aa	Known RBP	24.41	■■□□□ 1.5
NECAB3-222	ENST00000607805	C1QTNF1	Q9BXJ1	281 aa		24.41	■■□□□ 1.5
NECAB3-222	ENST00000607805	TRIO	O75962	3097 aa		24.41	■■□□□ 1.5
NECAB3-222	ENST00000607805	FRMPD4	Q14CM0	1322 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	MUC6	Q6W4X9	2439 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	LOXHD1	Q8IVV2	1947 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	CYTH3	O43739	400 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	LGR5	O75473	907 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	BCAS3	Q9H6U6	928 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	PIEZO1	Q92508	2521 aa		24.4	■■□□□ 1.5
NECAB3-222	ENST00000607805	EMSY	Q7Z589	1322 aa		24.39	■■□□□ 1.5
NECAB3-222	ENST00000607805	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	24.39	■■□□□ 1.49
NECAB3-222	ENST00000607805	EXOC6	Q8TAG9	804 aa		24.39	■■□□□ 1.49
NECAB3-222	ENST00000607805	PIGS	Q96S52	555 aa		24.39	■■□□□ 1.49
NECAB3-222	ENST00000607805	SENP2	Q9HC62	589 aa		24.39	■■□□□ 1.49
NECAB3-222	ENST00000607805	COL4A6	Q14031	1691 aa		24.39	■■□□□ 1.49
NECAB3-222	ENST00000607805	SORBS3	O60504	671 aa		24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	CCND2	P30279	289 aa		24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	HTRA4	P83105	476 aa	Predicted RBP	24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	TROAP	Q12815	778 aa		24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	PLEKHG4	Q58EX7	1191 aa		24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	DBF4B	Q8NFT6	615 aa		24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	SP7	Q8TDD2	431 aa	Predicted RBP	24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	ZFP91	Q96JP5	570 aa	Predicted RBP	24.38	■■□□□ 1.49
NECAB3-222	ENST00000607805	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	RSPH10B2	B2RC85	870 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	GCOM1	H8Y6P7	765 aa	Predicted RBP	24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	CYP21A2	P08686	494 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	RSPH10B	P0C881	870 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	POLR2M	P0CAP2	368 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	ICAM3	P32942	547 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	MRPS9	P82933	396 aa	Known RBP	24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	EPHX3	Q9H6B9	360 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805	MTUS1	Q9ULD2	1270 aa		24.37	■■□□□ 1.49

Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms