RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CYP39A1Q9NYL5 469 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 UBIAD1Q9Y5Z9 338 aa19.83■□□□□ 0.77
SHKBP1-224ENST00000600718 KDM3AQ9Y4C1 1321 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 TMEM119Q4V9L6 283 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 ERMNQ8TAM6 284 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 NUDT12Q9BQG2 462 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 PDCD2LQ9BRP1 358 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 NT5C3AQ9H0P0 336 aa19.83■□□□□ 0.76
SHKBP1-224ENST00000600718 EIF2AK2P19525 551 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 CLCN1P35523 988 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 COPB2P35606 906 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 CCT6AP40227 531 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 AMPD3Q01432 767 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 MLKLQ8NB16 471 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 NSUN6Q8TEA1 469 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 MS4A4AQ96JQ5 239 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 A1CFQ9NQ94 594 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 JADE2Q9NQC1 790 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 VAV3Q9UKW4 847 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 PNMA3Q9UL41 463 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 SLC45A1Q9Y2W3 748 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 A0A0G2JMZ2 1700 aa19.82■□□□□ 0.76
SHKBP1-224ENST00000600718 CNMDO75829 334 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 PSMD10O75832 226 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 SLC25A27O95847 323 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 ARP10275 920 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 ITGB5P18084 799 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 MRPS9P82933 396 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 CUL4BQ13620 913 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 LRCH2Q5VUJ6 765 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 CST9Q5W186 159 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 HAUS3Q68CZ6 603 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 LRRC15Q8TF66 581 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 GTF3C2Q8WUA4 911 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 ZNF577Q9BSK1 485 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 BECN2A8MW95 431 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 CASP1P29466 404 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 SEMA3FQ13275 785 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 NCAPH2Q6IBW4 605 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 SV2BQ7L1I2 683 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 OTOP1Q7RTM1 612 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 RIT2Q99578 217 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 PAGR1Q9BTK6 254 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 WDR11Q9BZH6 1224 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 BLZF1Q9H2G9 400 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 BLOC1S4Q9NUP1 217 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 RMND1Q9NWS8 449 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 RBPJLQ9UBG7 517 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 DACH1Q9UI36 760 aa19.81■□□□□ 0.76
SHKBP1-224ENST00000600718 PFASO15067 1338 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 GOLGA6L19H0YKK7 550 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 ZBTB48P10074 688 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 BMP6P22004 513 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 CCND2P30279 289 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 PPP2R5CQ13362 524 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 SPRYD7Q5W111 196 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 VSIG10LQ86VR7 867 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 ZFP91Q96JP5 570 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 C7orf25Q9BPX7 421 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 LRRC27Q9C0I9 530 aa19.8■□□□□ 0.76
SHKBP1-224ENST00000600718 IPO5O00410 1097 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 GAS7O60861 476 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 MYCLP12524 364 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 CT47A1Q5JQC4 288 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 DHX40Q8IX18 779 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 ANKRD35Q8N283 1001 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 LARP4BQ92615 738 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 RAD54LQ92698 747 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 PURBQ96QR8 312 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 MOV10L1Q9BXT6 1211 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 CCL15-CCL14A0A0B4J2E2 113 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 SMTNL1A8MU46 457 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 RPN1P04843 607 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 NR3C2P08235 984 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 RPA1P27694 616 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 CCDC173Q0VFZ6 552 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 ECM1Q16610 540 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 CCL15Q16663 113 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 NCAPG2Q86XI2 1143 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 KCTD17Q8N5Z5 321 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 DNERQ8NFT8 737 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 TEKT3Q9BXF9 490 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 KCNH7Q9NS40 1196 aa19.79■□□□□ 0.76
SHKBP1-224ENST00000600718 PEX10O60683 326 aa19.78■□□□□ 0.76
SHKBP1-224ENST00000600718 MTMR1Q13613 665 aa19.78■□□□□ 0.76
SHKBP1-224ENST00000600718 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHKBP1-224ENST00000600718 ANKRD23Q86SG2 305 aa19.78■□□□□ 0.76
SHKBP1-224ENST00000600718 POLR3CQ9BUI4 534 aaPredicted RBP19.78■□□□□ 0.76
SHKBP1-224ENST00000600718 MED24O75448 989 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 KCNB1Q14721 858 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 AOPEPQ8N6M6 819 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 PPP1R9BQ96SB3 815 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 IWS1Q96ST2 819 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 TRIM9Q9C026 710 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 AGO4Q9HCK5 861 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 TXNRD2Q9NNW7 524 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 KIAA1024Q9UPX6 916 aa19.77■□□□□ 0.76
SHKBP1-224ENST00000600718 BTBD19C9JJ37 291 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 PDHXO00330 501 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms