RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TM6SF1Q9BZW5 370 aa25.66■■□□□ 1.7
GTF2F1-204ENST00000594965 TRIP12Q14669 1992 aaPredicted RBP25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 SPATA31C2B4DYI2 1134 aa25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 HOXD8P13378 290 aaPredicted RBP25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 CYP2C18P33260 490 aa25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 DGKDQ16760 1214 aa25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 NOC4LQ9BVI4 516 aaKnown RBP25.65■■□□□ 1.7
GTF2F1-204ENST00000594965 SCN5AQ14524 2016 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 CCDC196A0A1B0GTZ2 297 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 NAPAP54920 295 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 NTRK3Q16288 839 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 HSDL1Q3SXM5 330 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 GNPTABQ3T906 1256 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 PPP1R18Q6NYC8 613 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 XRRA1Q6P2D8 792 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 C16orf59Q7L2K0 433 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 HIPK3Q9H422 1215 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 RIC8AQ9NPQ8 531 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 BARHL2Q9NY43 387 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 PCDHA6Q9UN73 950 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 PCDHA8Q9Y5H6 950 aa25.64■■□□□ 1.7
GTF2F1-204ENST00000594965 hCG_1984214I3L0E3 225 aa25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 CSF2RAP15509 400 aa25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 PDIA3P30101 505 aaKnown RBP25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 PTPN11Q06124 597 aaPredicted RBP25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 PFKFB3Q16875 520 aaPredicted RBP25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 ZNF713Q8N859 430 aaPredicted RBP25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 UPF3BQ9BZI7 483 aaKnown RBP25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 CYP46A1Q9Y6A2 500 aa25.63■■□□□ 1.69
GTF2F1-204ENST00000594965 TANC1Q9C0D5 1861 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 FIBPO43427 364 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 CYP2C9P11712 490 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 PKN1Q16512 942 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 FAM47CQ5HY64 1035 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 SPATA33Q96N06 139 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 WNT8AQ9H1J5 351 aa25.62■■□□□ 1.69
GTF2F1-204ENST00000594965 SMCO2A6NFE2 343 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 SPDYE3A6NKU9 549 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 HAS3O00219 553 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 PRPF3O43395 683 aaKnown RBP25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 F2P00734 622 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 ZNF286BP0CG31 522 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 PPIGQ13427 754 aaKnown RBP eCLIP25.61■■□□□ 1.695e-7■■□□□ 13.4
GTF2F1-204ENST00000594965 SESTD1Q86VW0 696 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 TMEM199Q8N511 208 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 MLXIPQ9HAP2 919 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 TELO2Q9Y4R8 837 aa25.61■■□□□ 1.69
GTF2F1-204ENST00000594965 PPFIA4O75335 1185 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 SUPT20HL2P0C7V6 817 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 SCG2P13521 617 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 ITGB5P18084 799 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 PSEN2P49810 448 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 CHMP4BP1P59074 171 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 CCT2P78371 535 aaKnown RBP25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 GPR153Q6NV75 609 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 PHKBQ93100 1093 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 CTAGE1Q96RT6 745 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.6■■□□□ 1.693e-8■■■■■ 30.2
GTF2F1-204ENST00000594965 LARP6Q9BRS8 491 aaKnown RBP25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 NCOA5Q9HCD5 579 aaKnown RBP25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 UBIAD1Q9Y5Z9 338 aa25.6■■□□□ 1.69
GTF2F1-204ENST00000594965 CLK2P49760 499 aaKnown RBP25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 ADCY7P51828 1080 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 CCL23P55773 120 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 NEDD9Q14511 834 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 TMEM240Q5SV17 173 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 METTL7BQ6UX53 244 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 CYFIP1Q7L576 1253 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 NLRX1Q86UT6 975 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 TEX2Q8IWB9 1127 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 PGBD1Q96JS3 809 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 SENP7Q9BQF6 1050 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 C16orf70Q9BSU1 422 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 TMEM260Q9NX78 707 aa25.59■■□□□ 1.69
GTF2F1-204ENST00000594965 ADAMTS3O15072 1205 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 ATP9AO75110 1047 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 PPFIA3O75145 1194 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 ACRP10323 421 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 MFSD10Q14728 455 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 GDF6Q6KF10 455 aaPredicted RBP25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 GPRASP2Q96D09 838 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 VWCEQ96DN2 955 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 ALG1Q9BT22 464 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 HDAC6Q9UBN7 1215 aa25.58■■□□□ 1.69
GTF2F1-204ENST00000594965 IFNAR1P17181 557 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 KIAA0753Q2KHM9 967 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 RNPC3Q96LT9 517 aaKnown RBP25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 KATNAL1Q9BW62 490 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 RNF26Q9BY78 433 aaPredicted RBP25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 ANO3Q9BYT9 981 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 IL23AQ9NPF7 189 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 PDRG1Q9NUG6 133 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 GTF2IRD1Q9UHL9 959 aa25.57■■□□□ 1.68
GTF2F1-204ENST00000594965 KCNA2P16389 499 aa25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 PTGISQ16647 500 aa25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 ZNF274Q96GC6 653 aaPredicted RBP25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 SCLYQ96I15 445 aa25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 GPR20Q99678 358 aa25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 JADE2Q9NQC1 790 aa25.56■■□□□ 1.68
GTF2F1-204ENST00000594965 GBF1Q92538 1859 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms